Cicer arietinum (chickpea): 101510767
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Entry
101510767 CDS
T02819
Name
(RefSeq) E3 ubiquitin-protein ligase COP1
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
cam
Cicer arietinum (chickpea)
Pathway
cam04120
Ubiquitin mediated proteolysis
cam04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
cam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101510767
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
101510767
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cam04121
]
101510767
Enzymes [BR:
cam01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101510767
Ubiquitin system [BR:
cam04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101510767
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
101510767
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_EIPR1
zf-C3HC4_2
EIF3I
Beta-prop_DCAF4
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
zf-C3HC4
WD40_RFWD3
WD40_like
WD40_MABP1-WDR62_1st
Beta-prop_CAF1B_HIR1
zf-C3HC4_3
zf-RING_2
zf-RING_UBOX
Beta-prop_WDR75_1st
Beta-prop_WDR35_TULP_N
zf-C3HC4_4
Beta-prop_DCAF12
U-box
Beta-prop_SCAP
zf-RING_5
DUF1664
Beta-prop_IFT122_2nd
zf-Nse
YbfN
Motif
Other DBs
NCBI-GeneID:
101510767
NCBI-ProteinID:
XP_004491092
UniProt:
A0A1S2XLB9
LinkDB
All DBs
Position
2:48018126..48032318
Genome browser
AA seq
672 aa
AA seq
DB search
MEEHSVGPLVPAVVKPEPSKPFSSDNTVAGEIFPVASMSEPDKDFLCPICMQIIKDAFLT
ACGHSFCYMCIITHLRNKSDCPCCGHYLTSSNLFPNFLLDKLLKKTSDRQISKTASPVEH
FRQALQKGCDVTMKELDTLLSLLAEKKRKMEQEEAERNMQILLDFLHCLRKQKVDELKEV
QTDLQFIKEDIGAVEKHRMDLYRARDRYSVKLRMLDDSGGRKSWHSSMDRNSSGLASSPL
NIRGGLSSGSHTKKNDGKSQISSHGHGIQRRDPISGSDSQFINQSGLALVRKKRVHTQFN
DLQECYLQKRRQTADKPHGQQERDTNFISREGYSGGLEDFQSVLTTFTRYSRLRVIAEIR
HGDIFHSANIVSSIEFDRDDDLFATAGVSRRIKVFDFSAVVNEPTDAHCPVVEMTTRSKL
SCLSWNKYAKNQIASSDYEGIVTVWDVTTRKSLMEYEEHEKRAWSVDFSRTDPSMLVSGS
DDCKVKVWCTNQEASVLNIDMKANICCVKYNPGSGNYIAVGSADHHIHYYDLRNISRPVH
VFSGHKKAVSYVKFLSNDELASASTDSTLRLWDVKENIPVRTFRGHANEKNFVGLTVSSE
YIACGSETNEVFVYHKEISKPLTWHRFSSPDMDDAEDEAGSYFISAVCWKSDRPTILTAN
SQGTIKVLVLAA
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggaagaacactcagtgggacctctcgtccctgcagtagtgaaacccgaaccttctaaa
ccgttttcctccgacaacaccgtcgccggcgaaattttcccggtcgcttccatgtccgag
ccggataaagacttcctctgtccgatttgtatgcagataatcaaagacgcgttcctcacc
gcttgtggtcatagcttctgctacatgtgcatcattactcatcttcgtaacaaaagcgac
tgtccttgctgtggtcattacctcaccagcagtaacttgttcccgaacttccttctcgat
aagctactaaaaaagacgtccgatcggcaaatttcaaagactgcttcccctgtggaacat
ttccggcaggcgttacaaaagggttgtgatgtgacaatgaaggagctcgacacacttttg
tcactccttgccgagaaaaaaagaaaaatggaacaagaagaagctgagagaaatatgcaa
atattattagatttcttgcattgcttacgcaagcaaaaagttgatgagttgaaggaggta
caaactgatctccagttcataaaggaggacattggtgcagtggagaaacatagaatggac
ttgtatcgtgctcgggacaggtactctgtgaaattgcggatgcttgatgattctggtgga
aggaaatcatggcattcatcaatggacaggaatagcagtggccttgcatctagtccctta
aatattcgaggagggttgtcttcagggagccatactaagaaaaatgatggaaagtctcaa
atcagctctcatgggcacggaatccagagaagagatcccatcagtggatcagattcgcaa
tttataaatcaatcgggtcttgctctagttagaaaaaagagggtgcatacacagttcaat
gacctacaagaatgttatctacaaaaacgacggcagactgcagataagccacatggccaa
caagaaagagatacaaatttcataagtcgagaaggttacagtggtggtcttgaagatttt
cagtcagtcttgacaactttcacacgctacagtcgattgagagtcattgcagaaataagg
catggggatatatttcattcagccaacatcgtttcaagcatagagtttgaccgcgatgat
gatttgtttgctactgctggagtttcacgacgcattaaagtttttgacttttccgcggtt
gtgaatgaacccacagatgctcattgtcctgttgtggagatgactacacgttcaaaactt
agttgcttgagttggaacaaatatgctaagaatcaaatagctagtagtgattatgaagga
attgtgactgtttgggatgtgaccactcgaaagagtttaatggaatatgaagagcatgaa
aagcgtgcatggagtgttgatttttcaagaacagatccctctatgcttgtatctggtagt
gatgactgtaaggtcaaagtttggtgcacaaatcaggaggccagtgttctaaatatagac
atgaaagcaaacatatgttgtgtgaagtataatcctggatctgggaattacattgcagtt
gggtcagcagaccatcacattcattattatgatttgagaaatattagtcgtccagtccat
gttttcagtgggcacaagaaggctgtttcatacgtgaaatttttgtccaatgatgaactt
gcatcggcatcaacagatagtacactgcgattatgggatgtgaaggaaaacataccggtt
cgtactttcagaggccatgcaaatgagaagaactttgttggccttacagtaagcagtgaa
tacattgcatgtggcagtgaaacaaatgaagtatttgtctaccataaggaaatctccaag
cctcttacttggcatagatttagttcccctgacatggatgatgcggaagatgaggctgga
tcttacttcatcagtgctgtatgctggaagagtgatcgccccaccatactaactgcaaat
agtcaaggcactatcaaagtgctggtgcttgcagcttaa
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