Cicer arietinum (chickpea): 101511453
Help
Entry
101511453 CDS
T02819
Name
(RefSeq) uncharacterized protein isoform X1
KO
K19026
spatacsin
Organism
cam
Cicer arietinum (chickpea)
Brite
KEGG Orthology (KO) [BR:
cam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cam03400
]
101511453
DNA repair and recombination proteins [BR:
cam03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
101511453
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spatacsin_C
DUF2110_C
Motif
Other DBs
NCBI-GeneID:
101511453
NCBI-ProteinID:
XP_004504003
UniProt:
A0A1S2YG38
LinkDB
All DBs
Position
6:7378403..7407344
Genome browser
AA seq
3224 aa
AA seq
DB search
MDCALGSEDPAILQLHNWDPSETQFGLSDFREAFISPSREILLLHSYQKEALLFPLVEGE
SHSSDPESGDDYHNPGSSTLSSQAFDRPSGSGLVNDLPCTSGSETGIDANVAEIKCSRSN
SYPFISDVNSLAWARCGDSYDQHNDASFREFLFVSGRCGVTVHAFSKPTQAREIVHSALE
GSYRQGRWVEWGPVATLAQNMELGESSSLSHKVSGGQNVNWTGGDDGGVEFLRDSAPTKR
YLKSFFTKVETTVTDSSLWTKFPENSKFHSSTEVVSFNIFDGSLSLEYLFNEKSVQNKED
RQEADDLVEDASNNSNSSSCTADIKSDCFSNVFGIEINGFYECPKVFSSASYCLMGFYLT
LMHDVPVNISDANQRGRSKNLLLVAKLDNWGIQWVSLVKLDERTNIVQAVEWMDFQFCDN
LLVCLGSSGLIVLYSAMSGEFVTHINVSQACGLNPPFEFQGLENDDTSNKHGRDIKDNLS
DQHSDSLRRSFKRLVVASHTYFLAVVDACGVIYVISLSEYVTDKSYISEKLLPYCRQFGL
GMLVGWGAGGSDIDCQAVFSNFSGYFKSNDLNIKRGSVSSLDKAVAGDTLQKIDGYTSEE
WRNLCGSYSSGFSSASKVTNDHKFIGSDVKSPVMRKILLPNFKLCEDDSISFSPRGITIL
SKMKNIKNHKGSKLVHFNLQVKLDVHDDNFLDSAYDEYRFNGKEEAVVGEVVGCTFQGCF
YIVREDGLSVYIPSGSLVSSFLPVEYIGYRQPSKDRGISVLLKDNVEVREPTKRFSPWKI
EILDRVLVYEGIEEADQLCLKNGWDIKVSRIRQLQIALDYLKFDEIEKSLEMLVDVNLAE
EGILRLLFAAIYLMLNRSGNDSETSAASRLLALATCFATTMLRKYGLLQHKKDTCIADGL
NMTGLLSLPPIEPVKLQTEVDFGQKLGELAHFLEIIRTLQFRHRTVFQKASRGLVDSGEE
SSVMSIEILHEEPKLAVLPSDLESLDMLNQHELSFPLPASGGGNNENLALVPVGSESNLI
SEEFGNLSHLEKKVLPLENPREMMARWKVGNPDLKTVVKDALLSGRLPLAVLQLHLHQSE
DLIADKGPHDTFTEVRDIGRAVAYDLFLKGETELAVATLQRLGENIEYCLKQLLFGTVRR
SLRAQIAEEMKRYGYLGPYELKILEDMSLIESLYPSSGFWKTYHHRLKDTSVPSDSVSPV
ENRLRLLHNHSFDSLVIECGEIDGIVLDTWMNIDENSSALEVDDDDAHVGYWAAAAVWFD
AWEQRTVDRMILNQSFRSDISLLWESQLDYHLCRNNWKEVFRLLDLMPAYVRSAGSLQLN
LDVVQPVSTSPCHVKSSNYGNFLCSLEELDSVCMEVPDVQIYKFSPDICSGWIRMLMEEK
LAKRFIFLREYWEGTTELVALLARSGYISGKNNFWLEDDHNEASLVRDGTAQALHKIFVH
HCAQYNLPNVLDLYLDHHRLVLDLDSLYALQESAVDCEWARWLLLSRVKGSEYKASLANA
RSIMSRDLAPRSDLGVLELDEIIQTVDDIAEGGGEMAALATLMHASIPIQSCLNSGGVNR
HSNSSAQCTLENLRPTLLRFPTLWRTLVGACLGQDTKGLLVTKAKTVGHAALSDYLSWRD
DIFLSTGRDTSLLQMLPCWFPKPVRRLIQLYVQGPLGCQSFSAFPMGETLLHRDIDLFIS
PDLPAEISAISWEATIQRHIEEELHGSLLEENGFGLEHHLHRGRALAAFNQILGHRVQNL
KSEWEASSSSHGQSNIQSDVQKILSPLEQREDTLLSSVLSTAILHFEDSMLVASCAFLLE
LCGLSASKMRIDVAVLKRISSFYKSSETNENLKQLSPNGSVFHAISHEGDVTESLARALA
DEYLHKDSPVIASKVGASSKQSSRALMLVLHHLEKASLPRLIDGNTYGSWILCGNGDGNE
LRSHRKVSSQHWSLVTNFCRLHQLPLSTKYLSVLARDNDWIEFLSEAQIGGYPFDTVVQV
ASKEFSDPRLRLHMLTVLRGMQSKKKAGSASFLDTLEKNSETTFPDENICIPVELFQILA
VCEKQKCPGEALLIKAKELSWSTLAMVASCFLDVSPLSCLTVWLEITAARETSSIKVNDT
ASQIADNVGAAVNATNSLPVGDRVLTFHYNRQSPKRRRLISPASLDSAASAMSDISSTSI
NEGIFHSQGKTMEDEITEEQCGSVNVARVSDEGPASLSKMVAVLCEQQLFSPLLRAFEMF
LPSCPLLPFVRALQAFSQMRLSEASAHLGSFSARIKEEPMHVQANLGREGQIGTSWISST
AATAADAVLSTCPSPYEKRCLLQLLAATDFGDGGYAAAYYRRLYWKINLAEPLLRKDDEL
HLGNENWDDASLLSALEKNRHWEQARNWAKQLEASGAPWKSAMHHVTESQAESMVAEWKE
FLWDVAEERVALWSHCHTLFIRYSFPSLQAGLFFLKHAEAVEKDLPARELHELLLLSLQW
LSGMISLSNPVCPLQLLREIETKVWLLAVESETQVKSEGDINFTFSIRENASKNDSSIID
RTASIIAKMDNHINTMRNRTVEKYESRENNQIPHKNQVVDAPLSTSFGGSTKPKRRAKGY
VALRRPALDSVEKSADTDDGSNTISFKNELQLQEENLKVEMSFSRWEERVGAAELERAVL
SLLEFGQITAAKQLQYKFSPGQMPSEFRLVDAALKLASMSTPPSNISVSMLDEEVRSVMQ
MYGLMNDKHRVDPLQILESLVVIFTEGSGRGLCKRIIAVIKAANTLGLSFLEAFNKQPIE
LLQLLSLKAQESFEEAKFLVQTHPMPATSIAQILAESFLKGVLAAHRGGYMDSQKEEGPA
PLLWRFSDFLKWAELCPSEPEIGHALMRLVITGQEIPHACEVELLILSHHFYKSSACLDG
VDVLVALAATRVDAYVLEGEFSCLARLITGVGNFYALNFILGILIENGQLDLLLQKYSAA
ADTNTGTAEAVRGFRMAVLTSLKHFNPNDLDAFALVYTHFDMKHETATLLESRAEQSCEQ
WFRRYNKDQNEDLLDSMRYFIEAAEVHSSIDAGNKTRKDCAQASLLSLQIRMPDFNWLYQ
SETNARRALVEQSRFQEALIVAEAYNLNQPSEWALVLWNQMLKPEVMEEFVAEFVAVLPL
QPSMLNDLARFYRAEVAARGDQSHFSVWLTGGGLPAEWAKYLGRSFRCLLKRTRDLRLRV
QLATVATGFGDVIDACTQEMDKVPDNAAPLVLRKGHGGAYLPLM
NT seq
9675 nt
NT seq
+upstream
nt +downstream
nt
atggattgtgccctgggcagcgaggatcctgctatacttcagttgcacaactgggacccg
tccgagactcaatttgggctttcggattttcgtgaagcttttatttctccttctagagag
attcttcttttgcattcatatcaaaaagaagctctgttgtttcctctcgttgaaggagag
tcacattctagtgatcctgaaagtggtgatgattatcacaatccaggttcatcaactctt
tcctcgcaggcattcgatagacctagtggatcaggtttggtgaatgatttaccatgtact
tcaggatcagaaactggtattgatgccaatgttgctgaaattaaatgttcaagatccaat
agttacccatttattagtgatgtgaactcattggcctgggctcgttgtggggacagctat
gatcagcacaatgatgcttcatttagagaatttttatttgtttcgggaaggtgtggtgta
acagtccatgccttttccaaaccgactcaagccagagaaatagttcattctgcattagaa
ggtagctatagacaaggtaggtgggtggaatgggggcctgtcgctactttagctcaaaat
atggaactgggagaatcttccagccttagtcacaaagtctccggaggccagaatgtaaat
tggaccggtggagatgatggcggagtggaatttttgagagactctgcaccgactaagaga
tatttaaagtcatttttcacaaaagttgaaactactgtaactgatagtagcctctggacc
aagttccctgaaaatagcaaatttcattcctctacagaagtggtttcttttaacatattt
gatggaagtctatccctggaatatctcttcaacgaaaaatcagtccaaaataaggaggat
cggcaggaagcggacgatttagttgaagatgcttctaataattcaaactcgagctcgtgt
acagcggatattaaatctgattgtttttccaatgtatttggtattgagattaatgggttc
tatgaatgccctaaagtgttctcgagtgcttcatattgcttgatgggattttatttgaca
ttgatgcatgatgtgcctgtcaatattagtgatgcaaatcaaagaggcaggagcaaaaac
ttacttcttgttgccaagttagacaattggggtattcagtgggtttcattggtgaagctt
gatgaaagaacgaacatagttcaggcagttgagtggatggatttccaattttgtgataat
cttcttgtctgtcttggttcgtctggcttgattgttctatattctgcaatgtctggtgaa
ttcgtgacacatataaatgtttcacaggcttgtggacttaaccctccttttgaattccaa
gggttagaaaatgatgatacaagcaataaacacgggcgtgacattaaggataacttgtct
gatcagcacagtgattctttaagaagatcatttaaaaggttggttgttgcttcacatacc
tactttttagctgtggtggatgcatgtggtgtgatctatgtgatatctttaagtgaatat
gttactgacaagagttatatatctgagaagttgcttccatattgtcggcaatttggactg
gggatgttggttggttggggagctggtggttctgatatagattgtcaagcagtattctct
aatttctcgggctattttaaatcaaatgatttaaacataaaaagaggaagtgtttcttcc
ctagacaaagctgtggcgggtgatacactccagaaaattgatggctacacatctgaagaa
tggcgcaatttgtgcggctcctattcaagtggtttttcttctgcatctaaagtaactaat
gatcacaaatttattggttctgatgtgaagtcgcctgttatgagaaagatattacttccc
aattttaaactatgtgaagatgattctatttctttttctcctaggggaattactattctc
tctaaaatgaagaatataaagaatcacaaaggctcaaaacttgtgcattttaatctgcaa
gtgaagttagatgtccacgatgacaactttttagatagtgcttatgatgaataccgcttt
aatggaaaagaagaagcagttgttggagaagtagttggttgcacatttcagggttgtttc
tatatcgtgagagaagatggtctatcagtgtatattccgtctgggtcactcgtatcaagt
ttccttcctgttgagtacattggttatcgtcaaccaagtaaagatagagggatttcggtt
ctgcttaaagacaatgtggaagtaagagaaccaaccaaaaggttttctccttggaaaatt
gaaattttggacagagttcttgtttatgaaggaattgaagaggcagatcagttgtgtttg
aaaaatggatgggacataaaagtttctcgtattcgtcagttacaaatagcattggactac
ttgaaatttgatgaaatagaaaaatctttggaaatgcttgtggacgtgaatctagcagaa
gaggggattttgagattgctttttgctgcaatttatcttatgcttaatagaagtggcaat
gatagcgaaacttctgctgcttcaaggcttcttgcactggctacttgctttgcaactaca
atgcttcgcaagtatgggttgctacaacataaaaaagatacatgcatagcagatgggttg
aatatgacaggattgctttctcttcccccaattgaaccagtgaaattacaaactgaagtg
gattttggtcaaaaacttggtgagctggctcatttcttggagatcatccgaactctgcaa
tttaggcataggacagtattccaaaaggccagtcgaggattggttgacagtggagaagag
tcgtctgttatgagtatagaaatactgcacgaagaacccaaacttgcagttcttccatca
gatttagagtcattggatatgttaaaccaacacgagctttcttttcctttaccagcatca
ggcggtggcaataatgagaatcttgcgttggtacctgttggttctgagtctaatttgatc
tcagaggaatttggtaacttatctcatttggaaaagaaagtcttgcctcttgaaaatcca
agagagatgatggcacgctggaaggtaggtaatccagacctcaagactgtggttaaagat
gctctgctttctggcagactccctttggctgttcttcaactgcatcttcatcaatcagaa
gatttaattgccgacaaagggcctcacgatacttttactgaagttcgtgacattggcaga
gctgttgcttatgacttatttctgaagggtgaaactgaacttgctgttgcaacacttcaa
agacttggagagaacattgaatactgtctcaaacagcttttgtttggcaccgtaaggaga
tccttacgagcccagattgctgaggaaatgaaaagatatggatatctaggaccatatgag
ttgaagatattggaagacatgtcattgattgagagtctctatccaagcagtggtttctgg
aaaacatatcatcaccggctgaaagataccagtgttccatcagattctgtttcaccggta
gaaaatagattaaggctcttgcataaccattcatttgatagtcttgtcattgaatgtggt
gagattgatggaattgtcttggatacatggatgaatattgatgaaaattcctctgctctg
gaagttgacgatgatgatgctcatgttggatattgggctgctgctgctgtctggtttgat
gcctgggagcaaagaactgttgaccggatgatactgaatcaatcttttcgttcagacatt
tctttattgtgggaatcacaacttgactaccacttgtgccgtaataattggaaggaagtc
tttagattgttagacttaatgcctgcatatgtccgatctgctggaagccttcagctcaat
ttggatgttgtacagcctgtgtcaacttcaccatgccatgtgaagtcgtctaattatgga
aattttctatgctctcttgaagaattggattctgtatgcatggaagttccagatgtccaa
atatataagttttcacctgatatttgctctgggtggataaggatgcttatggaggaaaag
cttgcaaaaagatttatatttttgagggaatattgggaagggacaacggaattggtagct
cttttggctcgttcaggttacatatctggcaaaaataatttctggttggaggatgatcac
aatgaggcttcattagttagagatggaactgcacaagccttgcataaaatatttgtgcac
cactgtgcacaatataacttgccaaatgttttggatctgtaccttgaccatcatcgtttg
gtccttgatctcgattcactttatgcattacaggaatctgcagttgattgtgaatgggca
agatggcttctcttatctagagttaaggggtctgaatacaaggcttcacttgccaatgct
cgttcaattatgtcacgtgatttagctcctagaagtgaccttggtgttctggagttggat
gaaataattcaaactgttgatgacatagctgaaggagggggagaaatggcagctctagct
actctgatgcatgcttctatccccattcaaagctgcttaaatagtggtggtgtaaataga
cacagtaattcctctgcccagtgcacattggagaatcttaggccgacattgctaaggttt
cctacattgtggcgcacacttgttggagcatgtcttggtcaagatacgaagggcttgttg
gtcaccaaagcaaaaactgttggacatgcagctttatcggactatcttagttggcgcgat
gacatttttttgtctactggacgtgatacttcacttcttcaaatgcttccgtgctggttt
cctaagcccgtaagaagattgatacagctttatgtccagggtcctcttggttgccaatca
ttttcagcgttccctatgggggaaactttgctacacagagatattgacttattcataagt
cctgatttgcctgctgagataagtgcaatctcctgggaggcaactatccaacgacacatt
gaagaagaactacacggttcattacttgaggaaaatggatttggacttgagcatcatttg
catcgtggacgggcgttggcagcttttaaccaaattcttggccatagagttcaaaatctg
aagtcagaatgggaagccagtagctcatctcatgggcaatctaacattcaatcagatgtt
cagaaaattctttcaccactagaacaacgcgaagatactcttctttcatctgttttgtca
actgcaattttgcattttgaggattctatgcttgttgcttcatgtgcttttcttctggag
ctatgtggtttatctgccagcaagatgcgcatcgacgttgctgtgctaaaacggatatct
tctttctacaaatcaagtgaaactaatgaaaatctcaagcaattatcacctaatggatct
gtgtttcatgccatatcccatgaaggtgatgtaacagaatctcttgctcgagctctagct
gatgaatacttgcacaaggattctcctgtaattgcttccaaagtgggagcttcaagtaaa
cagtcttcacgagctcttatgcttgtcttacaccatttggaaaaggcaagccttccacgg
ttgattgatggaaatacctatgggtcatggatattatgtggaaatggtgatggaaatgag
ttaagatctcaccgaaaggtttccagccagcactggtctttggtaacaaatttttgtagg
ttgcaccagcttcccttaagtacaaagtacctttctgtattagcaagagacaatgactgg
attgaatttttgtctgaagctcagatcggaggatatccatttgatacagtagtccaagtg
gcatcgaaagaattcagtgatccacgtctcagacttcatatgttaacagttttgagagga
atgcaatcgaagaaaaaggcaggctccgcatcattcttggacacactggagaaaaacagt
gaaacaacgtttcctgatgaaaacatatgcattccagttgaactcttccaaatattagca
gtgtgcgaaaagcaaaagtgtccaggggaggctctcttgattaaagcaaaagagttgtcc
tggtcaacattggcaatggttgcttcatgtttccttgatgtctctccattgtcatgtctg
acagtgtggttggaaattactgcagcaagagaaacttcatcgatcaaggtgaacgacact
gcttctcagattgcagacaatgttggagcggctgtaaatgcaacaaattccctacctgta
ggtgacagagtactcacatttcattataataggcagagtcctaaacgtcgacggttaata
agtcctgcttcactagactccgcagcttctgcaatgtctgacatctcaagtacttctata
aatgaaggaatatttcattcccaaggtaagactatggaggatgaaataacagaagaacaa
tgtggatctgttaatgttgcaagggtttccgatgaaggacctgcttctctttccaagatg
gttgcagtgctttgtgaacagcagttgttctcacctttgctaagggcgtttgagatgttc
cttccatcatgtcccttgctgccatttgtccgtgctcttcaggcattttcacaaatgcga
ctctcagaagcttctgcacatttgggctccttttctgctcgaattaaggaagaaccgatg
cacgtacaggcaaatttaggaagagaggggcagattgggacatcatggattagttctact
gctgctacagctgctgatgctgtgctttcaacctgcccttctccatatgagaaaagatgc
ttgctgcaacttcttgctgccacagactttggtgatggtggatatgctgcggcatactat
cgaaggctttattggaaaattaatttagcagagcctttacttcgtaaagatgatgagttg
catttaggtaatgaaaattgggatgatgcttcactcttgtctgcactagaaaaaaataga
cactgggagcaagcaaggaactgggccaagcagttggaggccagtggtgcaccctggaaa
tctgctatgcatcatgttactgaatcacaggctgaatctatggttgctgaatggaaggaa
tttctttgggatgtggcagaagagagggttgctttatggagccactgccacacactattc
atcagatattcctttccttctcttcaagctgggttattttttcttaaacatgccgaagct
gttgagaaagatcttcctgcaagggagcttcatgaacttttattgctttctctgcaatgg
ctgagtgggatgattagtctttccaaccctgtctgcccgctgcaacttctgcgtgaaatt
gaaaccaaagtatggctcttagccgttgaatccgagactcaggtgaagagtgaaggagac
atcaattttaccttttctatcagggagaatgctagcaagaacgactccagtattattgac
cgaactgcaagtataatagcaaagatggacaaccatataaatacaatgaggaatagaact
gtagaaaaatatgagtccagggaaaacaaccaaatccctcacaagaatcaagtggtggat
gctcctctttcaacttcttttggtgggagtacaaagccaaaacgaagggccaaaggatat
gtggcgttgagacgcccagctcttgactcggtagaaaaaagtgcagataccgatgatgga
tccaatactatcagtttcaaaaatgagttgcaattacaagaagaaaacttgaaagtggag
atgtctttttctaggtgggaggaaagggttggagcagcagagttggaaagagctgttctt
tcgttattggaatttgggcaaatcactgccgccaagcaactacagtacaaattctcccct
ggacaaatgccatccgagtttagacttgtggatgcagccttgaagcttgcttctatgtca
actcctcctagcaatatatcagtgtcaatgcttgatgaggaagtgcgttcagttatgcag
atgtatggtttaatgaatgataagcaccgtgttgacccacttcagattttggagagtttg
gtggtcatttttacggaaggcagtgggcgtgggctatgtaagagaataatagcagttata
aaagctgcaaacaccttgggcctctcatttcttgaggcattcaataagcaaccaattgag
ctactacagctgctttctcttaaagcacaagagtcctttgaggaggccaaatttcttgtg
cagactcatccgatgccagctaccagtattgctcaaatacttgcagaatctttcctgaag
ggtgtgttagctgcacatcgtggaggatatatggattcacaaaaagaggaaggccctgct
cccctgctgtggagattctcagacttcttgaaatgggcagagctttgcccctctgaacca
gagatcgggcatgctttaatgcgattggtgataactggacaagaaataccacatgcctgt
gaggttgagcttcttattctgtcccatcacttctacaaatcatctgcttgccttgatgga
gttgatgttctcgtggcccttgctgcaactagggttgatgcttatgtgttggagggtgaa
ttctcgtgtttggctcgcctgataactggagttggaaatttttatgcgctcaatttcatt
cttggaattcttatagaaaatggtcaattggatcttcttcttcagaagtattctgctgcc
gcagacacaaacacaggcactgctgaggctgtcagaggatttcgaatggcagttcttaca
tctttgaagcatttcaaccctaatgaccttgatgcatttgccctggtctacactcatttt
gatatgaaacatgagacagctactcttttagagtctagagcagagcaatcgtgtgaacag
tggtttcgccgctataacaaggaccagaatgaagacttattggattccatgcgctacttc
attgaagctgctgaagttcactcttccattgatgctggcaataaaacacgtaaggattgt
gctcaagcttcccttctgtcccttcaaatacgaatgccagatttcaattggctttatcaa
tcagaaaccaacgctagacgagccttagttgagcagtctcgtttccaagaagctttaatt
gtagctgaagcttataacttgaaccagccaagtgaatgggctttggtactctggaaccaa
atgctcaaacctgaagtcatggaggagtttgtagctgaatttgtggcagttctacctctt
cagccttcaatgttgaatgatttggcaagattttatagagctgaagtggctgcaagaggg
gatcaatctcatttctctgtatggctcacagggggagggttgcctgctgaatgggctaaa
tatttaggaagatcattcaggtgtttgctgaaacggacaagggatttgaggttgcgagtg
cagttggctacagtggcaactggatttggggatgtaattgatgcatgcacgcaagaaatg
gataaggtccctgacaatgcggcacccttagtgctaaggaaaggtcatggtggagcttac
ctccctttaatgtga
DBGET
integrated database retrieval system
