Cicer arietinum (chickpea): 101511647
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Entry
101511647 CDS
T02819
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein PRP4-like protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
cam
Cicer arietinum (chickpea)
Pathway
cam03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cam00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101511647
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cam03041
]
101511647
Spliceosome [BR:
cam03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
101511647
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40_Prp19
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR3_2nd
WD40_Gbeta
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WDR55
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_C
Beta-prop_DCAF4
ANAPC4_WD40
PRP4
Beta-prop_WDR75_1st
Beta-prop_Aladin
Beta-prop_EIPR1
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
Beta-prop_WDR41
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_SCAP
WD40_RFWD3
WD_LRWD1
eIF2A
Beta-prop_Nup120_160
WD40_like
Motif
Other DBs
NCBI-GeneID:
101511647
NCBI-ProteinID:
XP_004516365
UniProt:
A0A1S2Z7D8
LinkDB
All DBs
Position
4:34474808..34479054
Genome browser
AA seq
572 aa
AA seq
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MEVEMENTTLSVTGESSIPGSDVQDQNPVSVQPTLPQPPQPVIPPVITPVVPPLAPLPAV
PSSLVRPLAPLPVRPPVVRPPVPQNGEAGSSDSDSDDGADTRINKGTGEYEISEESRLVR
ERQEKAMQDLMMRRRAAALAVPTNDMAVRARLRHLGEPITLFGEREMERRDRLRMIMAKL
DAEGQLEKLMKALEDEEAATSAPKDEAEDDLQYPFYTEGSKSLLDARINIAKYSLVRAAL
RIQRAQRRRDDPDEDVDAEMDWTLKQAANLSLQFSEIGDDRPLTGCSFSRDGKGLATCSL
TGASKLWSMPNVKKVSTFKGHTERATDVAYSPMHNHLATASADRKAKYWNDQGSLLRTFE
GHLDRLARIAFHPSGKYLGTASFDKTWRLWDVETGEELLLQEGHSRSVYGLAFHHDGSLA
ASCGLDALARVWDLRTGRSVLALEGHVKPILGISFSPNGYHLATGGEDNTCRIWDLRKKK
SLYTIPAHSNLISQVKFEPQEGYFLVTASYDMTAKVWSGRDFKPVKTLSGHEAKVTSLDV
LGDGGYIVTVSHDRTIKLWSSSTTDEQAMDVD
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggaagtggagatggaaaacaccacattgagtgttactggtgaatcatctatacctggt
tctgatgttcaagatcaaaaccctgtttctgttcaaccaactttgccccagccacctcaa
cctgttattccaccagttattactcctgtcgtgcctcctctggctccacttcctgcagtt
ccttcctctcttgtccggcctctggcaccgcttccagtccggccaccagttgttaggcca
ccggttccgcaaaatggtgaggctgggtctagtgattctgattcagatgatggtgcagac
acccgaattaataagggtaccggggagtatgagatatcagaagagagtagactggtgagg
gagcgacaggagaaagcgatgcaagacctcatgatgaggaggcgtgctgctgctcttgct
gttcccacaaatgacatggcagtgagggcccgtcttcgccatcttggcgagccaattact
ctctttggcgagagggagatggagagaagagacaggttgcggatgattatggcaaagttg
gatgccgaaggtcagttggaaaagctaatgaaagctcttgaggatgaagaggccgcgacc
tctgctcccaaagatgaagctgaggatgatctgcagtatcctttttacactgaagggtca
aagtctctcctggatgcaaggattaatatcgctaaatattctttagtaagggccgcgttg
cgtattcaacgtgcccagagaagaagagatgatccagatgaagatgtggatgcagagatg
gattggacgttgaagcaggcagcgaatttgagtcttcaattcagtgaaataggagatgat
cgaccacttactggttgctcgttttcccgggatggaaaagggcttgctacctgttctcta
actggagcttccaagttgtggagcatgcctaatgtaaaaaaagtgtctaccttcaagggg
cacaccgagcgagctactgatgttgcttattctcctatgcacaatcatttagcaactgcc
tctgctgaccgtaaagcaaagtactggaatgatcaaggatcccttttgagaacatttgag
ggccatcttgatcgtcttgcacgcattgccttccatccatcagggaagtacctgggcact
gctagctttgacaagacatggagattatgggacgttgaaacaggagaggagttgcttctt
caagaaggccatagtagaagtgtatatggtttagcttttcatcacgatggatccttagct
gcatcttgtggactggatgctctggctcgtgtatgggaccttcgaactgggagaagtgtt
cttgccctagaaggtcatgtcaaacctattcttggcatcagtttttctcctaatggatac
catttagccactggcggtgaagataacacttgtcgcatttgggacttgaggaagaagaaa
tccttgtacaccattcctgctcactctaacttgatatctcaagtcaaatttgagccacag
gagggttactttttggtaactgcctcatatgatatgacagccaaggtttggtcaggacgg
gactttaagcccgtgaagacattatctgggcatgaagctaaagttacttctctggatgtt
cttggagatggtgggtatattgttactgtctcccatgaccgcaccataaagctatggtca
agcagcactactgatgagcaagctatggatgttgattaa
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