Cicer arietinum (chickpea): 101511892
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Entry
101511892 CDS
T02819
Name
(RefSeq) transcription initiation factor TFIID subunit 5 isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
cam
Cicer arietinum (chickpea)
Pathway
cam03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cam00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101511892
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cam03021
]
101511892
03036 Chromosome and associated proteins [BR:
cam03036
]
101511892
Transcription machinery [BR:
cam03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
101511892
Coactivators
SAGA/TFTC/STAGA complex
101511892
Chromosome and associated proteins [BR:
cam03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
101511892
STAGA complex
101511892
TFTC complex
101511892
SAGA complex
101511892
SLIK complex
101511892
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_EML
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_SPT8
Beta-prop_HPS5
Ge1_WD40
Beta-prop_Vps41
Beta-prop_Nup120_160
LisH
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF12
WD40_like
Cytochrom_D1
Beta-prop_VPS8
WD_LRWD1
PALB2_WD40
PROPPIN
Motif
Other DBs
NCBI-GeneID:
101511892
NCBI-ProteinID:
XP_012571685
UniProt:
A0A1S3E7B2
LinkDB
All DBs
Position
5:74075874..74085375
Genome browser
AA seq
670 aa
AA seq
DB search
MDEDEILGYVTAYLKKKGFKQTEKVFQEEFQQNKSSSSSNSILEPDIANHLLAFSQLENG
PARYHNGYSRLRTWTYSSLDLYRHELLRVLYPVFIHCFMDLVAKGHIQEARNFFNTFRED
HEMMHLRDLQKLEGVLSPTHLKEMEFAHSLRQSKFNIKICEYSYELLLQHLHSTQSTTIL
GIINEHINFQVTSGQPSLISDDPEAVTLTGSSQEAANQTNQKEIHWGLLEDSLEERLEKA
GALLSDSEKGDGEAKEGENDESKKRSTEVGKQGGSVKKIKKDKGGSATGKSAKPEANTVS
AAPRVKPELPLPIIPTEVEHSILDDLRNRVQLSSAALPSVSFYTFINTHNSLSCSSISHD
GSLVAGGFSDSSLKVWDMAKLGQQPSTSLSQGENDASQNEQMLGKSGEKRQYTLFQGHSG
PVYAASFSPLGDFLLSSSADSTIRLWSTKLDANLVCYKGHNYPVWDVQFSPAGHYFASSS
HDRTARIWSVDRIRPLRIMAGHLSDVDCVQWHVNCNYIATGSSDKTVRLWDVQSGECVRV
FVGHRGMILSLAMSPDGRYMASGDEDGTIMMWDLSSGRCVTPLVGHTSCVWSLAFSSEGA
ILASGSADCTVKLWDVNTSTKVSRIEEKNGNTNNRLRSLKTLTTKSTPVNALRFSRRNLL
FAAGALAKNA
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagacgaaatactaggttacgtaaccgcatacttgaagaagaaagggttcaaa
caaacggagaaggttttccaagaagaatttcaacagaacaaaagcagttcctcttcaaat
tccatcctcgaacctgatattgccaatcacctcctcgcattttctcaattggagaatggt
cctgcaaggtatcataatggatatagtagattaagaacgtggacttattcttcattagat
ttatacaggcatgaattgcttcgtgtgctttatccggtttttatacattgctttatggat
cttgttgctaaaggccatattcaagaagctcgaaattttttcaatactttccgtgaagac
catgaaatgatgcacttacgtgaccttcagaagctagaaggagttctttctccaactcat
ttgaaggaaatggaatttgctcattcacttaggcagagcaaattcaacatcaagatatgt
gagtattcctatgagcttctgttgcaacatctacacagtactcaatccaccactatactt
ggtataatcaatgagcatattaacttccaagttacctctggacaacctagcttgatttct
gatgatccagaggccgttacccttactggaagcagccaggaagcagcaaaccagacaaac
cagaaagaaatacattgggggttgcttgaagactcgctagaagaacggttggaaaaggct
ggggccttgctttcagactctgaaaagggtgacggggaagcaaaagagggggagaatgat
gagagtaagaaaagatcaactgaagtaggaaagcaaggtggttcagtcaaaaagataaaa
aaggacaagggtggaagtgcaacagggaaaagtgcaaaacctgaagctaacactgtatca
gcagctcctcgagttaaaccagaactccccttgcccataatcccaactgaggtagaacac
tccatccttgatgatttaaggaaccgtgtacaacttagtagtgccgcactgccatcagtt
agcttttacacttttatcaatacacataatagtttaagctgttcatcaatatcccatgat
ggatcgttggttgctggaggattttcggactcgtcactgaaggtttgggatatggcaaag
cttggacaacaaccctcaacctctctttcacagggtgagaatgatgcttcacaaaatgaa
caaatgctcgggaaaagcggtgagaaaagacagtatacactgtttcaaggtcattcaggg
cctgtttatgcagcgtctttttctcctcttggggattttttactttcatcctccgctgac
tccactattcgtttatggagcacaaagcttgatgccaatcttgtttgttacaagggccac
aattatcctgtctgggatgttcagtttagtccagcggggcattattttgccagctcttca
catgacagaactgctaggatttggtcagtggacaggatacggcccttaagaataatggcg
ggacacttgtctgatgttgattgcgtccaatggcatgtcaactgcaactacatcgcaacc
ggttccagtgacaaaacggttcgactatgggatgtgcagagtggagagtgtgtccgtgtt
tttgttggtcacaggggtatgattttgtccttggcaatgtctcctgatggtcgctatatg
gcatccggggatgaagatggcacaatcatgatgtgggacctttctagtggccgttgtgtc
acacctttggttggtcacacatcatgtgtctggtcactcgctttcagttctgaaggtgct
attctagcatctggctctgccgattgcactgtaaaactatgggatgtaaatacgagcacc
aaggtttcaaggattgaagagaaaaatgggaatactaacaacagactcagatcgctgaag
accctaacaaccaaatctactccggttaatgctctgcggttttctcgaaggaatcttctt
tttgcagctggagcacttgcaaaaaatgcttaa
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