Cicer arietinum (chickpea): 101511981
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Entry
101511981 CDS
T02819
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 15
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
cam
Cicer arietinum (chickpea)
Pathway
cam03013
Nucleocytoplasmic transport
cam03015
mRNA surveillance pathway
cam03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cam00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101511981
09122 Translation
03013 Nucleocytoplasmic transport
101511981
03015 mRNA surveillance pathway
101511981
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cam03019
]
101511981
03041 Spliceosome [BR:
cam03041
]
101511981
Enzymes [BR:
cam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101511981
Messenger RNA biogenesis [BR:
cam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
101511981
Spliceosome [BR:
cam03041
]
Complex C
Other components
EJC/TREX
101511981
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
101511981
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
101511981
NCBI-ProteinID:
XP_004498731
UniProt:
A0A1S2Y3C7
LinkDB
All DBs
Position
4:complement(60105207..60110846)
Genome browser
AA seq
427 aa
AA seq
DB search
MGETKDEAYEEELLDYEEEDDKAPDSAGTKVNGESGKKGYVGIHSSGFRDFLLKPELLRA
IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVPGQVSALVL
CHTRELAYQICHEFERFSTYLSDLKVAVFYGGVNIKVHKDLLKNECPHIVVGTPGRILAL
ARDKDLSLKNVRHFILDECDKMLESLDMRKDVQDIFKMTPHDKQVMMFSATLSKEIRPVC
KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLKEEEKNRKLNDLLDALDFNQVVIFVKSVSR
AAELDKLLVECNFPSICIHSGMSQEERLKRYKGFKEGHTRILVATDLVGRGIDIERVNIV
INYDMPDGADTYLHRVGRAGRFGTKGLAITFVSCSSDVDVLNNVQSRFEVDIKQLPEQID
TSTYMPS
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaaacaaaggacgaagcatacgaggaagagcttctcgactacgaagaggaggac
gacaaggctcctgattctgctggaactaaagttaatggtgaatctggaaaaaagggctac
gttgggatccacagttcaggatttagagactttcttctaaagccagagcttcttcgggcg
attgtcgactctggttttgagcatccttctgaagtgcaacatgagtgcatacctcaagca
atccttggaatggatgtgatctgccaagcaaaatctggaatgggaaaaactgctgttttt
gttctttcaactttgcagcagattgatcctgttccaggccaagtttctgctcttgttctg
tgtcatacaagggaattagcataccagatatgccatgagtttgagaggttcagcacctac
ttgtctgatctcaaggttgctgtcttttatggtggtgtcaatattaaagttcacaaggat
ctgttgaaaaatgaatgccctcatattgttgttggtacacctggaagaatactagcattg
gccagggacaaggacctttctttgaagaatgttaggcatttcattttggatgaatgtgat
aagatgctggaatcactggacatgaggaaagacgtgcaagatattttcaaaatgactccc
catgacaaacaagttatgatgttttctgcaaccctcagcaaggaaattcgcccagtctgc
aaaaaatttatgcaagatccaatggaaatttatgttgatgatgaagccaaattgaccctt
catggtctcgttcagcactacatcaaattgaaagaggaggagaagaaccggaagttgaat
gatcttcttgatgcattggacttcaatcaagttgtgatctttgtgaaaagtgttagtaga
gcagctgagctggataaactacttgtggagtgcaactttccatctatatgcattcattct
ggaatgtcccaggaagaaaggctgaagcgttataaagggttcaaggaggggcatacaagg
attcttgtcgcaacagatttggttggcaggggaatagacattgaacgtgtgaatatagta
ataaactatgacatgcctgacggtgcagacacatacttgcacagggttggccgagctgga
aggtttggcaccaaaggccttgcaattacgtttgtttcatgttcaagtgatgtggatgtt
ctcaacaatgttcagtcccgttttgaggtggatataaaacagcttcccgagcagattgat
acatcaacctacatgccatcataa
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