Cicer arietinum (chickpea): 101512418
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Entry
101512418 CDS
T02819
Name
(RefSeq) uncharacterized protein
KO
K12385
Niemann-Pick C1 protein
Organism
cam
Cicer arietinum (chickpea)
Pathway
cam04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
cam00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
101512418
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
101512418
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cam02000
]
101512418
Transporters [BR:
cam02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
101512418
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NPC1_N
Sterol-sensing
NPC1_MLD
Patched
MMPL
Glyco_hydro_64
MAGI_u1
Motif
Other DBs
NCBI-GeneID:
101512418
NCBI-ProteinID:
XP_012571469
UniProt:
A0A1S3E7X1
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Position
5
Genome browser
AA seq
1294 aa
AA seq
DB search
MDLRLGLLIFLSLLLQVCLILSLAEAENLSSRILLASNDRPIGERHSEDYCAMYDICGKR
SDGKVVNCPYGSPAVKPDDLLSSKIQSLCPTITGNVCCTEAQFDTLRTQVQQAIPFLVGC
PACLRNFLNLFCELTCSPSQSLFINVTSVDKVGANLTVGGIDYFVSDAFGEGLYQSCKDV
KFGTMNSRAMQFIGGGAQNVKEWFAFIGKKAAINGLGSPYAITFQPNAIRSSGMKPMNVS
AYSCGDISLGCSCGDCPSSSVCSNSSSTTTHKRDSCSLKVGTLMVKCVDLALAVLYIILI
CVFLGWGLYHRIRERKPTYRTKSMSNVVNGGVQYSHNQEKDENLPMHQIIEDASENRNEV
RLSAVQGYMSNFYRKYGSYVARNPKLVLASSLAIVIVLCLGLIRLKVETRPEKLWVGPGS
KAAEEKQFFDSHLAPFYRIEQLILATVPDHVNSTSPRIVSEDNIRFLFEIQKKVDAIRAN
YSGLMVSLQDICLKPLDTDCATQSVLQYFKMDPENFDNYGGVEHLNYCFEHYSSADQCMS
AFKGPLDPSTVLGGFSGNDYSGASAFIVTYPVNNAIDEEGNETAKAVAWEKTFIQLVKDE
LLPMVQSRNLTLAFSSESSIEEELKRESTADVITILVSYLVMFAYISLTLGDTPHPSSFY
LSSKVLLGLSGVILVMLSVLGSVGIFSALGVKSTLIIMEVIPFLVLAVGVDNMCILVHAV
KRQQLELPLERRISNALVEVGPSITLASLSEVLAFAAGSFISMPACRVFSMFAALAVLLD
FLLQVTAFVALIALDSLRAEDKRVDCFPCIKVDSLHADPHKGIGQRKPGLLARYMKEVHA
PILSIWGVKIFVIAIFVAFALASIALSTRIEPGLEQEIVLPRDSYLQGYFKNVSDYLRIG
PPLYFVVKNYNYSSESTHTNQLCSISQCNSDSLLNEIAKAALVPDTSYIAKPAASWLDDF
LVWVSPEAFGCCRKFTNGSYCPPDDQPPCCAPGEGSCVSVGVCNDCTTCFRHSDLHNDRP
STTQFREKLPWFLSALPSADCAKGGHGAYTSSVELKGYDSGIIQASSFRTYHTPLNKQAD
FVNSMRAAREFSSRVSDSLKIEIFPYSVFYMFFEQYLNIWKTALVNLAIAIGAVFIVCLV
ITCSLWSSAIILLVLTMIVVDLMGVMAILNIQLNAISVVNLVMSVGIAVEFCVHMTHSFT
VTSGNKDQRVKEALGTMGASVFSGITLTKLVGVIVLCFSRTEVFVVYYFQMYLSLVLLGF
LHGLVFLPVVLSIFGPPSRCKISDQGGDRSSTSS
NT seq
3885 nt
NT seq
+upstream
nt +downstream
nt
atggaccttcgtttagggcttctcatattcctctctctattattacaggtttgcttaatt
ttatctttagcagaagcagaaaatttgtcctcaaggattcttttggcatctaatgacaga
ccaataggggaaaggcattctgaagattactgtgcaatgtacgacatttgtggaaagcgc
agtgatggtaaagtagttaactgtccatatggttctccggctgtgaagccagatgatttg
ctttcatcgaagatccaaagtttgtgtccaacaattactgggaatgtttgctgtacagaa
gctcagtttgacacactaaggacacaagtgcaacaggcaattccttttcttgtaggttgt
ccagcatgcttacgaaactttctgaatctattctgcgagcttacgtgctccccaagtcag
agcttatttatcaatgtgacttcagtggacaaggttggagctaatttgacagtgggtggg
atcgattattttgtaagtgacgcttttggtgaagggttatatcagtcctgcaaagatgta
aagtttggtaccatgaattctcgagctatgcaatttatcggcggtggtgctcaaaatgtt
aaagagtggtttgcttttattggtaaaaaagcagccattaatggtcttggttcaccatat
gcaattacattccagccaaatgcaatcagatcatctgggatgaaacctatgaatgtttca
gcttattcgtgtggtgatatttctcttggctgttcttgtggtgactgtccttcatcttcg
gtatgctctaattcatcttcaactaccacccacaagagggattcatgttccttgaaagtt
gggactttaatggtgaaatgtgttgacttggctttagcagtcttatacatcatactgata
tgtgtgttcttgggttggggattgtatcatcggataagggaaagaaagccgacatataga
acaaaatcaatgtctaatgtcgttaatggtggtgtgcagtattctcataatcaggagaaa
gacgagaacctcccaatgcatcagattattgaagatgcttcagaaaatagaaacgaagta
cgactctcagctgtgcaaggatacatgtcaaatttttacaggaaatatggatcatatgta
gctagaaacccaaaattggtcttggcttcatctttggctatagttattgtactctgtcta
ggtctaatcagattgaaggttgagacgcggcctgagaagctctgggtgggacctgggagt
aaagcagcagaagagaagcagttttttgacagccatcttgctccgttttacagaatcgaa
cagctcatactggcaacagttccagatcatgtgaatagtacatcaccaagaattgtgtca
gaggacaacattaggtttctgtttgaaatacaaaagaaggttgatgcaattcgtgctaat
tattctggcttgatggtatctctccaagacatatgtttgaagccactagacacagattgt
gctactcaaagtgtcctgcagtacttcaaaatggaccccgaaaatttcgacaattatggt
ggagttgagcatctcaattattgttttgagcattattcctcagcagatcaatgtatgagt
gcatttaaaggtcctcttgatccaagcactgtattaggaggtttttccgggaatgactat
tctggggcttctgcgtttattgtaacttacccagtaaataatgctattgatgaagagggc
aatgaaactgcaaaggcagttgcatgggagaagacctttattcagttagtgaaggatgag
ttgttaccaatggtacaatcaagaaatttgacgctggctttttcatctgaaagctctata
gaggaagagttgaaaagagaaagtactgcagatgttattactatattggtcagctatctt
gtgatgttcgcatatatatctcttactttaggggatacaccccatccttcttctttctat
ctttcctctaaggtattgcttggtctttcaggagtaattcttgtcatgttgtctgtcctc
ggatctgttggaatatttagtgcactcggtgtaaaatctactttgatcatcatggaagtt
attccatttcttgttttagctgttggggttgacaatatgtgcatactagttcatgctgtg
aaaaggcaacagctggagttgcctttagaaagacgaataagcaatgcacttgtggaagta
ggaccatcaataacattggctagtttatcagaggttttagcatttgcagctggaagcttt
atttccatgcctgcatgtcgtgtcttctccatgtttgcagcattggctgttcttttggac
tttctcctgcaagttactgcatttgtagctctgatagctcttgactctttgagagctgag
gataagagggttgattgttttccatgcataaaagtggattctttgcatgcagaccctcat
aaaggcattggacaaaggaaacctggtttattggctcgatatatgaaggaggttcatgct
cccattctaagtatttggggagtaaaaatatttgtcattgcaatttttgtggcatttgca
ttggctagcatcgctttgagtactagaattgaacctggattagagcaggaaattgttctt
ccccgagactcatatcttcaggggtatttcaaaaatgtttccgactatctcagaattggg
ccacctctgtattttgttgtgaagaactataactatagctcagaatcaacacatacaaat
cagctttgctccattagccaatgcaattcagactctcttttaaatgagatcgctaaagct
gccctagtaccggacacaagttatattgcaaagccagctgcttcttggcttgatgatttt
cttgtgtgggtatctccagaagcatttgggtgctgcaggaagttcacaaatgggagttat
tgccctcctgatgatcagcctccttgctgtgctcctggagaaggctcttgtgtttcagtt
ggagtatgtaacgattgtacaacgtgtttccgtcattcagatctccacaatgatcgtccc
tccacaacacaatttagggagaaattgccgtggtttcttagtgctctgccatctgcggac
tgtgcaaaagggggtcatggggcatacaccagcagtgttgaactgaaaggctatgacagt
ggcattattcaagcatcatcattccgtacatatcataccccactcaacaagcaggctgac
tttgttaattccatgagggctgctcgagagttcagttcaagggtttctgattctttgaag
attgagatcttcccatattcagtgttttatatgttttttgagcaataccttaatatatgg
aagactgcactggtcaaccttgcaatagctattggtgcagtatttattgtatgcttagtt
atcacatgcagtttatggagttcagcaatcattttgttggtgttgaccatgattgttgtt
gatcttatgggtgtgatggcgattctgaatatccagctgaatgccatctcagtggtcaac
ctcgttatgtcagtgggcatcgctgtcgagttttgtgtgcatatgactcattctttcact
gtaacaagtggtaataaagatcagcgtgttaaggaggctctaggtacaatgggtgcttca
gtcttcagtggcatcacactaacaaagttggttggagttatcgttctctgcttctcaaga
acagaagtctttgtggtttattactttcagatgtacttgtcgttagtacttcttggtttt
ttgcacggacttgttttcttgccggtggtattaagcatctttggtccaccttcaagatgt
aaaatctctgaccaaggaggagatcgttcatcaacttcttcttag
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