Cicer arietinum (chickpea): 101513149
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Entry
101513149 CDS
T02819
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3-like
KO
K14829
pre-rRNA-processing protein IPI3
Organism
cam
Cicer arietinum (chickpea)
Brite
KEGG Orthology (KO) [BR:
cam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cam03009
]
101513149
Ribosome biogenesis [BR:
cam03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
101513149
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_SCAP
WD40_RFWD3
NBCH_WD40
Beta-prop_RIG_2nd
PEP5_VPS11_N
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_IP5PC_F
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
101513149
NCBI-ProteinID:
XP_012567394
UniProt:
A0A1S3DW43
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All DBs
Position
7:10188156..10192841
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AA seq
479 aa
AA seq
DB search
MQPRNRREMVVEEGEALVACSDKSMKIGVTIWDMDTGEKMLHIPTCASPPFGLLCLRNRF
LVASQLNKHGSVGGGAIVVWALNKPQQPLLNYTVEAIGPLSSTQDGIYLVGGAFSGSAYI
WNVTSGKLLKTWTAHYKSLKHIIFSNDDSLLISGSVDGMICVWSMISLLDVEEIGSWDPL
LHCLPGHMSSITGLLATSCSCFSILISSSLDGTCKVWDFITGKLMQTQGYPLAITCITLH
QRESLLFCGTENGTMIVNKVDIGLEEGPYSIIRGDQSLELKGHSGAITALTSSRAGLISS
SEDCTICIWDVMSWTITKRFNLQKGKVTNLVVINRSLVLSTSNHTRATNQYTVSPLDKCP
LQMNSYKRTTTLVSLSRLYKEKQTYIDLRSSNLLRQSISDSQKSYMHVAMTIQMKMETNI
ENHLWATKMAKHVTMINRQLQSRLLGLIHRRLFGSNRISFQKTGRKRPKIKSILPEEEN
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgcagccgcggaacaggagagaaatggtggtggaagaaggagaagcattggtggcgtgc
agtgacaaaagcatgaaaattggggtgacgatatgggacatggacacaggggaaaagatg
cttcacataccaacatgtgcttcaccaccttttggattattgtgtttaagaaatcgcttc
ctcgtcgcatcgcaattgaacaaacatggctctgttggtggtggagccattgttgtttgg
gccttgaacaagcctcagcaaccacttttgaattatacagtggaggccattgggccactt
tctagcacacaagatggcatataccttgtgggaggtgctttttctggaagtgcttatatc
tggaatgtgactagtggaaaattgttgaagacttggactgctcattataagtcactaaaa
cacattatattttcaaatgatgattctcttcttatttctggttcagttgatggtatgata
tgtgtttggtccatgattagtttgttagatgtggaagaaataggcagctgggatccttta
ttacattgtttgccagggcacatgtcctccataacaggtcttttagctacatcttgcagt
tgcttttcaattttaatatcaagctcccttgatggaacatgcaaggtttgggactttatc
actggaaagcttatgcaaactcaaggttatccgttggcaataacttgcatcacacttcac
caaagagaaagtctcttgttttgtggtactgaaaatggaacaatgattgtcaacaaggtt
gatattggtttggaagaaggtccttattccattatcagaggagaccaatcacttgaattg
aaaggtcacagtggagccataactgcattgacctctagtagggcaggcctaatatcttcc
tctgaagactgcacaatctgcatatgggatgtcatgagctggacaatcactaaaagattc
aatcttcaaaaaggaaaagtaactaatctcgtggtaataaatcggtctttggtgctctcc
acatcgaatcacacaagagccaccaatcaatatactgtttctccattggataagtgtcct
ctgcagatgaactcgtacaagagaactaccactcttgtttccttgagtcgcctctacaaa
gaaaaacaaacttacattgatttacgaagttctaatttattgagacaaagcatctctgat
tcacagaaatcatacatgcatgtggccatgaccatacaaatgaaaatggaaacaaatata
gagaatcatttatgggcaacaaagatggcaaaacatgtaacgatgataaacagacagttg
cagtcacggctgttgggcttgatacatcgcagattgtttggttcaaacagaatcagcttt
caaaaaacaggtagaaaaaggcccaaaattaagagtattttaccagaagaggagaattaa
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