Cicer arietinum (chickpea): 101513454
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Entry
101513454 CDS
T02819
Name
(RefSeq) U3 small nucleolar RNA-associated protein 21 homolog
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
cam
Cicer arietinum (chickpea)
Pathway
cam03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cam00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
101513454
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cam03009
]
101513454
Ribosome biogenesis [BR:
cam03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
101513454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp21
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
EIF3I
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_SPT8
Beta-prop_WDR19_1st
NBCH_WD40
Beta-prop_IFT122_1st
PEP5_VPS11_N
WD40_RFWD3
Beta-prop_SCAP
Beta-prop_VPS8
WDR54
Beta-prop_DCAF12
Beta-prop_IP5PC_F
VID27
WDCP
VPS8_N
Motif
Other DBs
NCBI-GeneID:
101513454
NCBI-ProteinID:
XP_004513123
UniProt:
A0A1S2Z142
LinkDB
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Position
8:28544232..28554047
Genome browser
AA seq
910 aa
AA seq
DB search
MGIFEPYRAIGCITSTVPFSVQRLGTETFITVSVGKAFQIFNCAKLTLSLVGPQLPKKIG
ALASYRDYTFAAYGNTIGVFKRAHQVATWTSHNAKVKFLLLFGEHIISLDVEGNMFLWAF
KGIEDNLVPFAHIMLDPKFSPTCIMHPDTYLNKVLIGSEQGLMQLWNISTKKKIFEFKGW
DSPITCCVSSPALDVVAVGCTDGRIHVHNIRYDEELVSFTHSTRGSVTALSFSTDGQPLL
ASGGSSGVISIWNLEKKRLQSVVREAHDGAITSLHFFANEPVLMSASADNSIKMWIFDTS
DGDPRLLRFRSGHSAPPLCIKFYANGRHILSAGQDRAFRLFSVVQDQQSRELSQRHVSKR
AKKLRVKEEEIKLKPVIAFDCAEIRERDWCNVVTCHMDTAQAYVWRLQNFVLGEHILNPC
PENPTPVKACAISACGNFAILGTAGGWIEKFNLQSGIHRGAYIDMSESRSCAHDGEVVGV
ACDSTNTLMISAGYQGDLKVWDFKERSLKSRWEIGCSVVKIVYHRYNGLLATVADDLTIR
LFDVVALRLVRKFEGHTDRITDLCFSEDGKWLLSSSMDGSLRIWDVILARQIDAIQVDVP
ITALSLSPNMDVLATTHVDQNGVYLWVSQAMFSSSSNVDSYASGKEIVSVKLPSISSTED
TQVEHSGELVNASQPKNATTFPTQDKQIPDLVTLSLLPKSQWQSLINLDIIKVRNKPIEP
PKKPEKAPFFLPSVPLLSGEILFEPGKVSLEEKDVKDEEKQTNKARLDTPQSRFLYLLQS
IDETDSYAAFTDYIKGLSPSTLDMELRMLQIIDDDDEQQEDGKRPELTWIEHLLDYFIFE
LSSRNNFEFLQAVIRLFLKIHGDTIRKHSHLQEKARKLLDIQCMVWHKVDKLFQSTRCVV
AFLSNCQIHV
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atgggtatttttgaaccttacagagctatcggatgtatcaccagcaccgtccccttctcc
gttcaaagactcggcaccgaaactttcatcactgtgagcgtcggaaaggcttttcagatt
ttcaactgtgcaaagctcactttgtctctcgttggtcctcaacttccgaagaagattggt
gctcttgcttcctatcgcgattatacttttgctgcatacggaaacaccattggtgttttc
aagcgtgcgcatcaggttgcaacttggaccagccataatgccaaagttaaatttcttctc
ttgtttggagaacatattatcagtcttgatgttgagggaaacatgttcttgtgggcgttc
aagggaatcgaggacaaccttgttccgtttgcccacattatgctagatccgaaatttagt
cccacttgtattatgcatccagatacttaccttaacaaggttcttattgggagtgagcaa
ggcctaatgcagctttggaacattagcacaaagaaaaaaatatttgagtttaagggatgg
gattcacctatcacctgttgtgtttcgtcacctgctttagatgttgttgcagttggctgt
actgatggaaggattcatgttcacaacatccgttacgacgaagaattggtttcatttaca
cattccacacgtggttctgtgactgctttatctttcagcactgatggacaaccccttctg
gcttctggaggttcatctggtgttataagcatatggaatcttgaaaagaaaaggctccag
tcagttgtaagagaggctcatgatggtgcaataacttcactacatttttttgctaatgag
ccagtgctaatgagtgcatcagcagacaactctattaaaatgtggatttttgacacaagt
gatggtgacccccgccttctgcgctttcgaagtgggcatagtgctcctcccctctgcata
aagttttatgccaatggaagacatattctatcagctggccaggatcgagcctttcgcctt
ttctctgttgtacaggatcaacaaagtagggagctttctcaacgccatgtgtctaaacgc
gctaagaagctgagagtcaaggaggaagaaataaaattgaagcctgtgattgcgtttgat
tgtgctgaaattagagagcgtgattggtgcaatgtggttacttgtcatatggatactgcc
caagcatatgtgtggagacttcaaaattttgttctaggagagcatatattgaatccatgc
cctgaaaatccaacacctgtaaaggcttgtgccatcagtgcttgtggcaattttgccatt
ttaggtacagccggtggttggatcgaaaaatttaaccttcaatcaggaattcataggggt
gcttacattgacatgtcagaatcaagaagttgtgctcatgatggtgaggtggttggagtt
gcttgtgactcaacaaatactctaatgataagtgcaggatatcaaggagatctaaaggtt
tgggatttcaaagaaaggagtcttaaatccagatgggaaattggttgttctgttgttaag
attgtttaccatcgttataatggtctcctggctacagtagcagatgatttaacaatcagg
ttgtttgatgtcgtggctctcagacttgttcgtaaatttgaaggtcacacagatcgtata
acagatttgtgcttcagtgaggatggtaagtggcttctgtcatccagtatggacggaagt
cttagaatttgggatgtgatcttagcaagacagatagatgctatacaagttgatgtgcct
atcacagcattatctctgtccccaaacatggatgtattagctactacccatgttgatcaa
aatggggtatacctgtgggtaagccaggcaatgttctctagtagttcaaatgttgattca
tatgcaagtggaaaagagattgtgagtgtcaagttgccatctatctcttccacagaagat
actcaagttgagcattctggtgagctggtgaatgcctctcaacctaagaatgctacaact
ttcccaactcaagataagcaaatacccgatttagttacactgtcattgctgcccaagagt
caatggcaaagcttgatcaatttagacattataaaggttcgcaataaacctattgagcct
cctaaaaaacctgaaaaggctccattcttcctgccttcagttccattgctctcgggggaa
atattgtttgagcctggtaaggtatcactagaggagaaggatgtaaaagatgaagaaaaa
caaacgaacaaggcaagattagatacgccacaatcccgctttctgtatcttcttcaatcg
atagacgagactgacagttatgcagctttcactgattatatcaaaggattatccccgtca
actctagatatggaactccgaatgcttcagatcattgatgatgatgatgagcagcaagaa
gatgggaagagacccgagttgacatggattgaacatcttctggattattttatttttgag
ctctcctctagaaataattttgagtttctacaagctgtcatcaggctatttttgaagata
catggcgatacaattcggaaacattcacacttgcaagaaaaagcaaggaagctcctagat
attcagtgcatggtatggcataaggtagataagttgtttcaaagtacgaggtgtgtagtt
gcctttcttagtaattgccaaattcatgtgtga
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