Cicer arietinum (chickpea): 101514088
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Entry
101514088 CDS
T02819
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 8-like
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
cam
Cicer arietinum (chickpea)
Pathway
cam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101514088
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cam03019
]
101514088
03036 Chromosome and associated proteins [BR:
cam03036
]
101514088
Enzymes [BR:
cam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101514088
Messenger RNA biogenesis [BR:
cam03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
101514088
mRNA degradation factors
5'-3' decay
Decapping complex
101514088
Chromosome and associated proteins [BR:
cam03036
]
Eukaryotic type
Gene silencing
piRNA pathway
101514088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
TFIIA
CMS1
Motif
Other DBs
NCBI-GeneID:
101514088
NCBI-ProteinID:
XP_004510805
UniProt:
A0A1S2YW03
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All DBs
Position
7:complement(52522360..52533158)
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AA seq
530 aa
AA seq
DB search
MNNNRARYPPPGIGPGRGGSNPNLNLNLNQNTNQNPNQNPNMNNQFQHRPSYQHHNQQQQ
HQQQQQQQQQQQQQYYVQRQMVQQQQQQQQQQQQQQQWLRRAQLGGSESNNVVDEVEKTV
QSEVADPSSQEWKARLKIPPPDTRYRTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPS
PIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQT
SQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCS
MLVMDEADKLLSPEFQPSIQQLIHFLPTNRQILMFSATYPVTVKDFKDRYLHKPYVINLM
DELTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSC
FYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHR
VGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAFYCR
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacaacagagcgagatatccacctcctgggatcggccccggacgtggaggttcc
aatcccaacctcaacctgaatctgaaccaaaataccaaccagaatccgaaccagaacccg
aacatgaacaatcagtttcagcacaggccatcttatcaacaccataaccaacagcaacag
caccaacagcagcaacagcaacaacagcagcagcaacaacaatactatgtgcagagacaa
atggtgcaacagcaacagcaacaacagcagcagcagcagcagcaacaacagtggctgaga
agggcgcagctgggtggttcagaatctaacaacgttgttgatgaggttgaaaagaccgtg
caatctgaagtcgctgaccctagttctcaagaatggaaggccagactaaagattccgcca
cctgatacacgctatagaacagaggatgtgacagctactaaaggaaatgaatttgaggat
tactttttgaaacgtgagctgctcatgggaatatatgagaagggttttgaaagaccttcc
cccatccaagaagaaagcatcccaattgctcttactggcagtgacattcttgctagggct
aaaaatggaactggcaaaacagctgctttttgtattcctgcattggaaaaaattgatcag
gataataatgttattcaagttgttatcttggtcccaacacgagagttggctttgcaaaca
tctcaagtgtgtaaagagcttggaaagcatttgaaaatccaagttatggttacaacaggt
ggtaccagcctaaaagatgatataatgcgtttatatcaaccagtccatttactagttgga
accccaggaaggatattggaccttgctaagaagggtgtttgtgttcttaaagattgctct
atgcttgtcatggatgaggctgataagcttctctccccagagttccaaccttccatacag
cagcttattcattttcttcctacaaaccgtcaaattctgatgttttcagcaacatatcct
gttactgtgaaggatttcaaagataggtatcttcataaaccatatgtcattaaccttatg
gatgagctaactctcaagggtattacacaattttatgcatttgttgaagagagacagaaa
gtccactgcttaaatactctcttttctaagctgcaaataaaccagtcaattatcttctgc
aattcagtgaatcgggttgaactccttgccaagaaaatcacagaacttgggtattcatgt
ttctatattcacgcaaagatgttgcaagaccatcgtaacagagtattccatgatttccgc
aatggtgcatgccgaaatcttgtctgtactgatctttttactaggggaatagacatccaa
gcagttaatgttgttattaattttgattttcccaagaactcggaaacttatttgcacagg
gttggtcgttcagggaggtttggccaccttggtttagcggtgaatttgatcacttatgag
gaccgctttaatttatataggattgaacaagaacttggcactgaaataaagcaaattccg
ccacacattgatcaagcattttattgccggtga
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