Cicer arietinum (chickpea): 101514260
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Entry
101514260 CDS
T02819
Name
(RefSeq) pre-mRNA-processing protein 40A-like
KO
K12821
pre-mRNA-processing factor 40
Organism
cam
Cicer arietinum (chickpea)
Pathway
cam03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cam00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101514260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cam03041
]
101514260
Spliceosome [BR:
cam03041
]
Complex A
U1 snRNP components
U1 related factors
101514260
Complex B
101514260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
SMODS
Motif
Other DBs
NCBI-GeneID:
101514260
NCBI-ProteinID:
XP_004496865
UniProt:
A0A1S2XZD1
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All DBs
Position
Ca4:14439377..14454285
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AA seq
1013 aa
AA seq
DB search
MSNNNPQYPGLQPIRPPIPGSVDPQRNFGPLMPVQFRSVVPPQQQQQFVPMPAQHYHQQF
NVGMPPQNQQPQFSQPIQQFPPRAGQQLPHPSQVIPMPVVRPNMQPSSESMMPQPDSQAP
NGYTPGLGGPGNGMPLSSSYMFAPSSYGQAQQPNFISTSQYQPVPQIQAPSGSSSQSITP
GTSHQSNGEQPTVATFMHSATVVQPHLAKVGPSDWIEHNSSTGRRFYYNKRTKLSSWEKP
FELMTPIERVDASTNWKEYSSPDGRKYYYNKITKESKWLIPEELKLAREQVEKAMINGAL
PEAVLNPRTQPSATSVSEAMPSADNSSLPGQGEPSSPVPVAPVVTTSPSNLQSEIAPGSC
GSPSTSAVTGTKVDEPEAPPVNTINPSDASVGSDRAIVSDINTSVTPMNDTNNFAAQDTV
GSADGVPGEDKDDGKIDSTGENVNEVASETKTVEPESLVYANKMEAKDAFKSLLESVNVG
PDWSWDRAMRLIINDKRYGALKSLGERKQAFNEYLSQRKKQEAEEKRMKHKKAREDFRKM
LEESTELTSSTRFSKAVAIFENDERFKAVERDRDRKDMFDSFLEELMNKERAKALEERKR
NTVEYRKFLESCDFIKANTQWRKVQDRLEADERCSRLEKIDRLEIFQDYLRDLEKEEEEQ
KKIQKEELRKTERKNRDEFRKLMDEHIASGILTAKTHWRDYHFKVKDLPAYLAVASNTSG
STPKELFEDVAEELEKQYVEEKSQIKDAVKLAKITLLTTWTFEDFKSALSEHISSPSTSD
SNLKLVFEELLERAKEKEEKEAKKRKRLADDFFRLLFSIKDITESSKWEDSEPLLEDSQE
FRSIGDASLCKQMFEEYVAQLREEAKENERKRKEERAKKDKDREERERRKSKQRREKEGG
RERWKEETHKRDRTDSDGLDFNEIQTSKENRRSDDDNRKQRKQHQSPEETDKERTKKSHG
HSSDRKKSRRHGSGHESDEGRHKRHRREHRDSHREGELLEDGEFGGDVVMDRW
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgtccaataataatccacaatatccaggtttacagcctattcggcctccgattcccggt
tcagtggatcctcagcgcaatttcggtccactcatgcctgttcaatttcgctctgttgtt
ccccctcaacagcaacaacagtttgttcccatgcctgctcaacattaccaccaacagttt
aatgtcggaatgcctcctcaaaatcagcagcctcaattttctcaaccaattcaacagttt
cccccgagagctggtcaacagttaccacacccatcacaggtgattccgatgccagttgtg
cggccgaacatgcagccatcatccgaatcaatgatgccacagcctgattctcaagctcca
aacggatacacaccgggtttaggtggcccaggaaatggaatgccactttcctcatcgtat
atgtttgcaccatcttcttatggtcaagcgcagcaacctaattttatttctactagccag
taccaacctgttccccaaatccaagctccctctggttcttcatctcaaagcattactcct
ggcacatctcatcagagcaatggtgaacaaccaacagttgcaactttcatgcattcagct
acagttgttcagccacaccttgccaaggttggcccttcagattggatcgagcataattct
tctactggaagaagattttactacaataagaggactaaattatctagctgggagaagcct
tttgaattgatgacacctattgagagggtggacgcatcaacaaattggaaggagtattcg
agtcctgatggaagaaagtattactacaacaagatcactaaggaatcaaagtggttaatt
cctgaggaactgaagttggcccgtgagcaagttgaaaaggcaatgatcaatggagcactt
cctgaggcagtactgaatccccgtactcaaccttctgcaacttctgtttctgaagcaatg
cctagtgcagataattcatctttacctggtcaaggtgaaccatcaagtcctgttcctgtt
gctccagttgttactacatccccaagtaatctgcagtctgagatagctcccggatcatgt
ggctctccttctacaagcgctgtaactggaacaaaagtggatgaacctgaggcaccaccc
gtaaatactatcaatccatcagatgctagtgtgggaagtgatagagctattgtttctgat
attaacactagtgtaacaccaatgaatgacaccaacaactttgcagctcaagatacggta
ggttctgcagatggagttccaggagaagataaagacgatggaaaaattgattcaacaggg
gagaacgttaatgaagtggcctctgaaacaaagacagttgagccagaatccttagtttat
gcgaataagatggaagctaaagatgcattcaaatcactcttggaatctgtaaatgttgga
ccggactggagttgggatcgggctatgcgattaataattaatgacaaaaggtatggtgcc
ttaaaatctctcggagaaaggaagcaagctttcaatgagtacttaagtcaaaggaaaaaa
caggaagcagaagaaaagcgtatgaagcacaaaaaagcacgggaagactttagaaaaatg
ttggaagagtccacggagttgacttcatccacaagattcagcaaagcagtagctattttt
gaaaatgatgaacgcttcaaggccgtcgagcgagatagagatcgcaaggatatgtttgat
agcttcttggaggaacttatgaacaaggaacgggctaaggcactggaggaacggaagcga
aatacagtggaatataggaaatttttggaatcttgtgactttataaaggctaatacgcag
tggcgaaaagttcaagaccgcttagaggctgatgaaagatgctctcgacttgagaaaatt
gatcgcttggaaatattccaagattatttacgtgatttagagaaggaagaggaagagcag
aagaagatacagaaggaagaattgagaaagacggaacgtaaaaaccgtgatgaattccgc
aaattgatggatgaacatattgcttcaggcattctcacagcaaaaactcactggcgtgat
tatcatttcaaggtgaaagatttaccagcctatctagcagtggcgtcaaacacctcaggt
tcaactccaaaagaattgtttgaagatgttgctgaagagctagagaaacaatatgttgaa
gaaaagagtcaaataaaagatgcagtgaagttggcaaagattacattgttgacaacctgg
acttttgaagacttcaaatcagctttatcagaacacattagctctccttctacatctgat
tccaacttaaagttagtgtttgaagagctactagaacgtgctaaggagaaggaggagaag
gaagctaagaagcgtaaacgtcttgcagatgatttctttcgtctactattttctatcaag
gacattaccgagtcttcaaagtgggaagactcggagccacttcttgaagatagccaagag
ttcagatctattggagacgcgagcctttgcaagcaaatgtttgaggagtatgttgcacaa
ctgagagaggaggcaaaggagaatgagcggaaacggaaagaggaaagggcaaagaaggat
aaagatagggaggaaagagaaagaaggaaatcgaagcaaagaagggaaaaagagggaggg
cgtgaaagatggaaagaggagacacataagagggatagaacagacagtgacggtctggac
tttaatgagatccaaacgtccaaagaaaacagaaggagtgacgatgacaacagaaaacaa
cggaagcagcatcaaagtccggaagaaactgataaagagaggactaagaaatctcacggt
cacagtagcgaccgcaagaaatccagacggcatggttctggtcacgaatctgacgaaggc
cggcacaagagacacaggagagagcaccgtgattctcatagagaaggtgagctgcttgaa
gatggagaatttggtggtgatgtggttatggatagatggtaa
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