Cicer arietinum (chickpea): 101514408
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Entry
101514408 CDS
T02819
Name
(RefSeq) WD repeat-containing protein PCN-like
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
cam
Cicer arietinum (chickpea)
Pathway
cam03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cam00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
101514408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cam03009
]
101514408
Ribosome biogenesis [BR:
cam03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
101514408
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
WD40
WDR55
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
Beta-prop_HPS5
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_TEP1_2nd
WD40_Gbeta
ANAPC4_WD40
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR41
WD40_MABP1-WDR62_2nd
Beta-prop_RSE1_2nd
Beta-prop_ACSF4
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_WDR35_TULP_N
PEP5_VPS11_N
WD40_2
Beta-prop_SCAP
Beta-prop_WDR11_1st
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
101514408
NCBI-ProteinID:
XP_004510306
UniProt:
A0A1S2YUW1
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Position
7:complement(58905907..58912537)
Genome browser
AA seq
824 aa
AA seq
DB search
MRRRQTRARRSSVTYNNHNDDINMEELHQSNSIDRSPSFVKVDGLKIDWKPSSVVALATS
VDGLRVAAARENGSLELWVVSPGEANWHCLLTIHGDPNKRVSSLVWCDGSAFGRLFSSNL
DGTVSTWDFFNLKQTTVLDSDGVSIWKMAVALPKGSVINAETKSDHLRKGQVDSDGSENS
ESDEDSDSPATVMQPVLEYPRVAIAYDDGCVKIYAVSDTDEFMYVKSLPRVKGRVLSVTW
SEDANYIYSGSSDGSIRIWDAMSGHEVDWMPAGCGGSGSGQKLCIWSLLCLRSGTLVSAD
SSGSVQFWDSRNRTLLQAHSLHEGDATALAAAPSHDMVFSAGSDGQVILYTMSKSSNNVN
SPTTMKWIHVKSVRAHTHDVRALTVAEPIVEEDFLPDERIKRIRTEKKPKDFRYNKSAHM
EGPMLISAGDDTKLCAYPVKNFTSTYFRDICPVPQRTPIQLVLNTAFNQSSMLLVQSSHC
LDIHLLQLRNVHTAGGHANPEMQRFKIYASIRVPSRASQQIICSTISNSGVFVAYSNQLK
TSLLELKCEVGKITLSTKKLPQRLPFIHSMIFTHDSTWLILAGHDRKIYVVDACSSALVH
TFTPRCELQDDESPLTEPPITKLFSSSNKQWLAAVNCFGDIYIFNLEILRQHWFISRLDG
ASVTAGGFAPQNNNVLIVTTSSNKVYAFDIEAKRLGEWSNRKTHALPFRDFPGEVIGLSF
LPSSSSSSFVVYSSRAMCLIDIGLSAEPDDNDVLDIQDSTARSLQNLTVKKQIKYKNFNV
LPLKNPVLFLAYMSKNSFFMVDKPWLEVVKSLETAPVHRHIYGS
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgcggcggagacaaacccgggcgcggcgtagctcagtcacttataacaaccacaacgat
gatataaacatggaagaacttcaccagagtaacagcattgatcggagtccttcctttgta
aaagtcgatggattgaaaattgattggaagccttcatctgtggtagctttagccaccagc
gtcgacggtttacgtgtcgcagccgctcgcgaaaatggttctcttgaactctgggtcgta
tctcctggtgaagccaattggcattgtctattgaccattcatggtgaccctaacaaaaga
gtttcttcacttgtttggtgtgatggttccgctttcggtcgtttattctcttctaattta
gatggcactgtttctacgtgggattttttcaacttgaaacaaacgacagtgctagattca
gatggtgtctcaatatggaaaatggctgttgcactgcctaagggtagtgttataaatgct
gagacaaagagtgatcatttgaggaagggacaagttgattccgatggatctgagaacagc
gaaagcgatgaagattctgactcacctgctactgtcatgcaacctgttcttgagtatcca
cgtgtagcaattgcgtatgatgatggatgtgtgaaaatttatgccgtctctgatacagat
gagtttatgtacgtcaaatccttgcctcgagtcaaaggacgagttttaagtgtgacttgg
agtgaagatgctaactacatatattctggcagtagtgacgggtcaatacgaatctgggat
gctatgtcaggtcatgaagtcgattggatgccagctggatgtggaggttcgggcagtgga
caaaaactttgtatatggtcactgctgtgtttaaggtctgggacacttgttagtgctgac
agtagcggcagtgtccagttttgggacagtcgaaaccgaacactgttgcaagcacattca
ttacatgagggagatgcaactgctcttgcagcagcacctagtcatgatatggtattctct
gctggttctgatggccaggttattctttatacgatgtcaaaatcatctaacaatgtcaat
tctccaacaacgatgaaatggatccatgttaaaagtgtaagggctcatacccacgatgtc
agggccttgactgttgcagaaccaatagttgaagaagattttttgcctgatgagaggatt
aaaagaattcgcactgaaaaaaaacccaaggatttcagatacaataagtcggcccatatg
gagggtcccatgctaatctctgcaggagatgatacaaaactatgtgcttaccctgtgaaa
aatttcactagtacttattttcgagatatatgtcctgtgcctcagagaacacctattcag
cttgtccttaatactgccttcaatcaatcgtcaatgcttttagtccagtcttcacattgt
ttagatattcatttgctacaactcagaaatgttcacacagctggaggccatgcaaatcct
gaaatgcagcgcttcaaaatatatgcatcaatcagagtcccaagtcgggcttctcaacag
ataatttgcagcaccatttctaattcaggggtgtttgttgcatactctaatcaattaaag
actagtctccttgaattgaagtgtgaagttgggaaaattacattaagtacaaaaaaactt
cctcaaagattaccatttatccattctatgatttttactcatgactccacttggttaata
ctagctgggcatgatagaaagatatatgttgtggatgcatgcagctcagcactagtgcac
acttttacaccccgttgtgagttgcaagatgacgaatcacctcttacggagccgcccata
acgaaattgtttagcagttctaataagcagtggttggcagccgtgaattgctttggagat
atatacatatttaacttggagatactaaggcagcactggttcatttcaagattagacggt
gcctctgttacagctggtggatttgcgccccagaacaacaatgtattgatagttacaact
tcctcaaataaagtgtatgcatttgacattgaggccaagaggttgggagaatggtcaaat
cggaagacacatgctcttcctttccgggattttcctggtgaagttattgggctttcattc
cttccttcgtcaagttcatcgtcgtttgttgtttatagctccagggcaatgtgcttgatt
gacattggtttgtctgccgaaccagatgacaatgatgtgctagatattcaagattcaaca
gcccggagtttacaaaatcttactgtcaagaaacaaattaaatataagaattttaatgtt
ttacccttaaagaatcctgttttatttttagcgtacatgtcaaaaaattcattctttatg
gtagacaaaccttggttggaagttgtcaagagtttagaaaccgcaccagtccacagacat
atttatgggtcataa
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