Cicer arietinum (chickpea): 101514515
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Entry
101514515 CDS
T02819
Name
(RefSeq) vam6/Vps39-like protein
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
cam
Cicer arietinum (chickpea)
Pathway
cam04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cam00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
101514515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cam04131
]
101514515
Membrane trafficking [BR:
cam04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
101514515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
Clathrin
TPR_Vps41
zf-HC5HC2H
AlaDh_PNT_N
Motif
Other DBs
NCBI-GeneID:
101514515
NCBI-ProteinID:
XP_004509257
UniProt:
A0A1S2YSL9
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Position
Ca7:13749552..13759343
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AA seq
1028 aa
AA seq
DB search
MVHSAYDSFELLTNCPSKIESIESYGSKILLGCTDGSLLIYAPESERSATVPEEMRKEAY
SLERSLKGFARRPVVSMQVVESRELLLSLSESIAFHRLPNFETIAVITKAKGANAFCWDE
RRGFLCFARQKRLCIFRHDDGRGFVEVKDFGVPDVVKSMSWCGENICLGIRKEYVILNAT
SGAISEVFTSGRLAPPLVVSLPSGELLLGKENIGVFVDQNGKLRPEGRICWSEAPAEVVI
QKPYALALLPRFLEIRSLRGPYPLIQTVVFRNVRHLRQSNNSVIIALENSVHGLFPVPLG
AQIVQLTAAGNFEEALSLCKLLPPEDSNLRAAKEGSIHIRYAHYLFDNGSYEESMEHFLA
SQVDITHVLSLYTSIILPKTTIVHDSDKLDIFGDALYLSRGSSAMSDDMEPSPASNMSES
DDNSELESKKMSYNMLMALIKFLQKKRHGIIEKATAEGTEEVVFDAVGNNFATYNSNRFK
KINKGRGSIPISSGAREMASILDTALLQALLLTGQPSLAENILRGLNYCDMKICEEILQE
GNYHVALVELYKCNSMHREALELINKLVKESSQSKIAHRFKPEAIIEYLKPLCETEPILV
LDYSMLVLESCPTQTMELFLSGNIPADMVNLYLKQHAPNLQAMYLELMLAANENAISGTL
QNEMVHIYLSEVLDWHADLSSQRKWDEKVYSPKRKKLLSALETMSGYNPETLLKLLPSDA
LYEERAILLGKMNQHELALALYVHKLHVQELALTYCDHLYESTHQHSVKSPSNIYLMLLQ
IYLNPRRTTDNYEKRISNLLSPQNKPIRMVSSKSLLRTRSRGSKKIAAIEFAEDTRAGLS
SDSGRSDADTDEFTEEGSTSIMLDEALDLLSRRWDRINGAEALKLLPKETKLQNLLPFLG
PLVRKYSEMYRNCSVVRNLRQSENLQVMQSRKQRATCSSYSDASSLLPCVRIYHDSICCA
QVKDEFYKKRKTAVKISGDNMCSLCHKKIGTSVFAVYPNGKTLVHFVCFRDSQSMKAVAK
GTPLKKAF
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atggtgcatagtgcctacgattccttcgagcttctcaccaattgtccatccaaaatcgaa
tcaatcgaatcgtacggatcaaagattctcttaggatgtaccgacggttctctcctcatt
tacgcgccggagtcggagcgatccgcgacggtgccggaggagatgcggaaagaggcgtat
tcactggagagaagcttaaaaggattcgcgaggaggcccgtggtttcaatgcaggtggtg
gaatcgagggagcttcttctctcgctttctgaatccatcgcgtttcataggcttcctaac
ttcgaaacaattgccgttatcaccaaggcgaaaggcgctaatgctttctgctgggacgag
cgtagaggcttcctgtgcttcgctaggcaaaaacgcctctgtatcttcagacacgacgat
ggtagaggatttgtggaggtgaaagactttggtgttcctgatgtggtgaaatcaatgagt
tggtgtggtgagaatatatgtttggggattagaaaagaatatgtgattctaaatgctaca
agtggtgcaatatctgaagtttttacttctgggaggctagcaccacctttggtagtatct
cttccttccggagagctccttctgggcaaggagaacattggcgtatttgtggaccaaaat
gggaaacttcgtccagaaggtaggatttgttggtcagaggccccagcagaagttgtaatt
cagaagccatatgctttagcccttctacccagatttttggagattcgatctctacgaggt
ccatatccattgatacaaacagtagtttttcgaaatgtacgccatcttcgccagagcaat
aattcagtcattattgctttagaaaattctgttcatggcctctttcctgttcctcttgga
gcccagattgtccaattaacagccgctggtaactttgaagaagccttgtcgttgtgcaag
ctcctcccacctgaagattcaaatcttcgtgctgcaaaggagggttcaattcatataaga
tatgcccactatctttttgacaacggcagctatgaggagtcaatggaacatttcctagca
tctcaagtagatataactcatgtgctttctctgtatacatccattatccttccaaagaca
actattgttcatgattcagataagctggacatttttggggatgctttgtatctctccaga
ggttcttcagctatgtctgatgatatggaaccatctcccgcatctaatatgtcagaatcg
gatgacaattcagaacttgaatcgaaaaaaatgagctacaatatgcttatggctctcata
aagtttttgcagaagaaaagacatggtattattgagaaggccactgcagaaggaactgag
gaggttgtttttgatgcagtcggtaataattttgcaacctataacagtaataggtttaag
aaaataaacaaggggcgtggtagtatacctattagttcgggagctcgggaaatggcttca
atattggatactgctctactccaagcattgctgctaactggacaaccgtctttggctgaa
aatatattgagagggcttaactactgtgatatgaaaatatgtgaagagatacttcaagaa
ggcaactatcatgttgctttggtagaactttacaagtgcaactcaatgcaccgggaggcc
cttgaacttattaacaaattggtgaaagagtctagccagtctaagattgcacacagattc
aagcctgaggccatcatcgagtacctcaagccactttgtgaaacagaacccatacttgta
ctagactactccatgcttgttcttgaaagctgcccaacccaaactatggagctctttttg
tctggaaatattccagcagatatggtcaacttatatttgaagcaacatgctccaaacttg
caagccatgtacttggagctcatgcttgcagcaaatgagaatgccatatctgggactttg
caaaatgaaatggtacatatctatctttctgaagtacttgattggcatgctgatttaagt
tctcaacggaaatgggatgagaaagtttattcccccaaaagaaaaaagttattgtctgcc
ttagagactatgtcaggatataatccagagactctgctgaaacttcttccatcggatgct
ttatacgaagagcgggctatattgttgggaaaaatgaaccaacatgaactagcattagct
ttgtatgttcataagcttcatgttcaagaactggcattgacatattgtgatcatctgtat
gaatctactcatcagcattctgtaaaatctcccagcaacatatacctaatgcttctgcaa
atctatttgaatccacggaggacaactgataactatgaaaagagaatttcaaatctatta
tcccctcagaataaacccattagaatggttagttctaaatcattattaagaactagaagc
cgaggatcaaagaaaattgctgcaatagagtttgcagaggacacaagagctggtctgagt
agcgacagtggtaggagtgatgctgacactgatgaatttactgaggaaggaagtacttct
atcatgcttgatgaggccctcgatttgttgagccgcagatgggatagaatcaatggagcc
gaggccctgaaactcctaccaaaagagaccaaactgcagaacttgcttccatttcttgga
ccccttgtgaggaaatatagtgaaatgtatcgtaattgctcggttgtcaggaacttgaga
cagagtgagaaccttcaggtaatgcaatctaggaaacagagagccacatgctcttcatat
tcagatgcttctagtttgttaccatgtgtacgtatctaccacgattcaatttgttgtgca
caggtgaaagatgaattctacaaaaagagaaaaacggctgtgaagattagtggtgataac
atgtgctccttgtgccataagaaaatagggactagtgtttttgcagtctatccgaatggg
aaaactctagtgcattttgtctgtttcagagattctcaaagtatgaaagctgttgcgaaa
gggactccattgaaaaaggcattttga
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