KEGG   Cicer arietinum (chickpea): 101514515
Entry
101514515         CDS       T02819                                 
Name
(RefSeq) vam6/Vps39-like protein
  KO
K20183  Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
cam  Cicer arietinum (chickpea)
Pathway
cam04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:cam00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    101514515
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cam04131]
    101514515
Membrane trafficking [BR:cam04131]
 Endosome - Lysosome transport
  Tethering complex
   Hops complex
    101514515
SSDB
Motif
Pfam: Vps39_1 CNH zf-Vps39_C Clathrin TPR_Vps41 zf-HC5HC2H AlaDh_PNT_N
Other DBs
NCBI-GeneID: 101514515
NCBI-ProteinID: XP_004509257
UniProt: A0A1S2YSL9
LinkDB
Position
Ca7:13749552..13759343
AA seq 1028 aa
MVHSAYDSFELLTNCPSKIESIESYGSKILLGCTDGSLLIYAPESERSATVPEEMRKEAY
SLERSLKGFARRPVVSMQVVESRELLLSLSESIAFHRLPNFETIAVITKAKGANAFCWDE
RRGFLCFARQKRLCIFRHDDGRGFVEVKDFGVPDVVKSMSWCGENICLGIRKEYVILNAT
SGAISEVFTSGRLAPPLVVSLPSGELLLGKENIGVFVDQNGKLRPEGRICWSEAPAEVVI
QKPYALALLPRFLEIRSLRGPYPLIQTVVFRNVRHLRQSNNSVIIALENSVHGLFPVPLG
AQIVQLTAAGNFEEALSLCKLLPPEDSNLRAAKEGSIHIRYAHYLFDNGSYEESMEHFLA
SQVDITHVLSLYTSIILPKTTIVHDSDKLDIFGDALYLSRGSSAMSDDMEPSPASNMSES
DDNSELESKKMSYNMLMALIKFLQKKRHGIIEKATAEGTEEVVFDAVGNNFATYNSNRFK
KINKGRGSIPISSGAREMASILDTALLQALLLTGQPSLAENILRGLNYCDMKICEEILQE
GNYHVALVELYKCNSMHREALELINKLVKESSQSKIAHRFKPEAIIEYLKPLCETEPILV
LDYSMLVLESCPTQTMELFLSGNIPADMVNLYLKQHAPNLQAMYLELMLAANENAISGTL
QNEMVHIYLSEVLDWHADLSSQRKWDEKVYSPKRKKLLSALETMSGYNPETLLKLLPSDA
LYEERAILLGKMNQHELALALYVHKLHVQELALTYCDHLYESTHQHSVKSPSNIYLMLLQ
IYLNPRRTTDNYEKRISNLLSPQNKPIRMVSSKSLLRTRSRGSKKIAAIEFAEDTRAGLS
SDSGRSDADTDEFTEEGSTSIMLDEALDLLSRRWDRINGAEALKLLPKETKLQNLLPFLG
PLVRKYSEMYRNCSVVRNLRQSENLQVMQSRKQRATCSSYSDASSLLPCVRIYHDSICCA
QVKDEFYKKRKTAVKISGDNMCSLCHKKIGTSVFAVYPNGKTLVHFVCFRDSQSMKAVAK
GTPLKKAF
NT seq 3087 nt   +upstreamnt  +downstreamnt
atggtgcatagtgcctacgattccttcgagcttctcaccaattgtccatccaaaatcgaa
tcaatcgaatcgtacggatcaaagattctcttaggatgtaccgacggttctctcctcatt
tacgcgccggagtcggagcgatccgcgacggtgccggaggagatgcggaaagaggcgtat
tcactggagagaagcttaaaaggattcgcgaggaggcccgtggtttcaatgcaggtggtg
gaatcgagggagcttcttctctcgctttctgaatccatcgcgtttcataggcttcctaac
ttcgaaacaattgccgttatcaccaaggcgaaaggcgctaatgctttctgctgggacgag
cgtagaggcttcctgtgcttcgctaggcaaaaacgcctctgtatcttcagacacgacgat
ggtagaggatttgtggaggtgaaagactttggtgttcctgatgtggtgaaatcaatgagt
tggtgtggtgagaatatatgtttggggattagaaaagaatatgtgattctaaatgctaca
agtggtgcaatatctgaagtttttacttctgggaggctagcaccacctttggtagtatct
cttccttccggagagctccttctgggcaaggagaacattggcgtatttgtggaccaaaat
gggaaacttcgtccagaaggtaggatttgttggtcagaggccccagcagaagttgtaatt
cagaagccatatgctttagcccttctacccagatttttggagattcgatctctacgaggt
ccatatccattgatacaaacagtagtttttcgaaatgtacgccatcttcgccagagcaat
aattcagtcattattgctttagaaaattctgttcatggcctctttcctgttcctcttgga
gcccagattgtccaattaacagccgctggtaactttgaagaagccttgtcgttgtgcaag
ctcctcccacctgaagattcaaatcttcgtgctgcaaaggagggttcaattcatataaga
tatgcccactatctttttgacaacggcagctatgaggagtcaatggaacatttcctagca
tctcaagtagatataactcatgtgctttctctgtatacatccattatccttccaaagaca
actattgttcatgattcagataagctggacatttttggggatgctttgtatctctccaga
ggttcttcagctatgtctgatgatatggaaccatctcccgcatctaatatgtcagaatcg
gatgacaattcagaacttgaatcgaaaaaaatgagctacaatatgcttatggctctcata
aagtttttgcagaagaaaagacatggtattattgagaaggccactgcagaaggaactgag
gaggttgtttttgatgcagtcggtaataattttgcaacctataacagtaataggtttaag
aaaataaacaaggggcgtggtagtatacctattagttcgggagctcgggaaatggcttca
atattggatactgctctactccaagcattgctgctaactggacaaccgtctttggctgaa
aatatattgagagggcttaactactgtgatatgaaaatatgtgaagagatacttcaagaa
ggcaactatcatgttgctttggtagaactttacaagtgcaactcaatgcaccgggaggcc
cttgaacttattaacaaattggtgaaagagtctagccagtctaagattgcacacagattc
aagcctgaggccatcatcgagtacctcaagccactttgtgaaacagaacccatacttgta
ctagactactccatgcttgttcttgaaagctgcccaacccaaactatggagctctttttg
tctggaaatattccagcagatatggtcaacttatatttgaagcaacatgctccaaacttg
caagccatgtacttggagctcatgcttgcagcaaatgagaatgccatatctgggactttg
caaaatgaaatggtacatatctatctttctgaagtacttgattggcatgctgatttaagt
tctcaacggaaatgggatgagaaagtttattcccccaaaagaaaaaagttattgtctgcc
ttagagactatgtcaggatataatccagagactctgctgaaacttcttccatcggatgct
ttatacgaagagcgggctatattgttgggaaaaatgaaccaacatgaactagcattagct
ttgtatgttcataagcttcatgttcaagaactggcattgacatattgtgatcatctgtat
gaatctactcatcagcattctgtaaaatctcccagcaacatatacctaatgcttctgcaa
atctatttgaatccacggaggacaactgataactatgaaaagagaatttcaaatctatta
tcccctcagaataaacccattagaatggttagttctaaatcattattaagaactagaagc
cgaggatcaaagaaaattgctgcaatagagtttgcagaggacacaagagctggtctgagt
agcgacagtggtaggagtgatgctgacactgatgaatttactgaggaaggaagtacttct
atcatgcttgatgaggccctcgatttgttgagccgcagatgggatagaatcaatggagcc
gaggccctgaaactcctaccaaaagagaccaaactgcagaacttgcttccatttcttgga
ccccttgtgaggaaatatagtgaaatgtatcgtaattgctcggttgtcaggaacttgaga
cagagtgagaaccttcaggtaatgcaatctaggaaacagagagccacatgctcttcatat
tcagatgcttctagtttgttaccatgtgtacgtatctaccacgattcaatttgttgtgca
caggtgaaagatgaattctacaaaaagagaaaaacggctgtgaagattagtggtgataac
atgtgctccttgtgccataagaaaatagggactagtgtttttgcagtctatccgaatggg
aaaactctagtgcattttgtctgtttcagagattctcaaagtatgaaagctgttgcgaaa
gggactccattgaaaaaggcattttga

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