Cicer arietinum (chickpea): 101515008
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Entry
101515008 CDS
T02819
Name
(RefSeq) uncharacterized protein isoform X1
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
cam
Cicer arietinum (chickpea)
Pathway
cam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101515008
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cam03000
]
101515008
03019 Messenger RNA biogenesis [BR:
cam03019
]
101515008
04121 Ubiquitin system [BR:
cam04121
]
101515008
Enzymes [BR:
cam01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101515008
Transcription factors [BR:
cam03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
101515008
Messenger RNA biogenesis [BR:
cam03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101515008
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
101515008
Ubiquitin system [BR:
cam04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101515008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
Baculo_IE-1
PcfJ
zf-RING_2
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
101515008
NCBI-ProteinID:
XP_004497457
UniProt:
A0A1S2Y0S1
LinkDB
All DBs
Position
4:complement(19489143..19497901)
Genome browser
AA seq
903 aa
AA seq
DB search
MGDKGGKSCPICTEEMDLTDQQLKPCKCGYEICVWCWHHIMEMAQKDETEGRCPACRSPY
DKERIVAMAANCRRLVAEMNSKHRKKIQKLKPKSSEGRKHLTDVRVIQRNLVYIIGLPLN
LADEDLLQRREYFGRYGKVLKVSISRTATGIIQHSANNSCCVYITYSKESEAVRCIQSVH
FFVLEGRSLRACFGTTKYCHAWLRNVPCNNRECLYLHDHGSHEDSFTKDELVLAFARSRV
LQIIGATNNLNRPSGSVLPPPPDDPRHMPSATKVVSKSPLDNQIKGSCSSIGAANSTALP
AANSWVRCVSGSLPQDTSSSSSSNLANRKIEASNDPLALTPGVACTEKSILDTIKSGEDE
SSSDVHSNSVFLPSELNKHHSGGNSQTSSVGIDQEMVVPSARTSFLEISRPHDFNINRAI
SNRDVHGLCSGLSSVSINSHLEGSDFTRGSDRILSTHNSINSSLGNHVHQDNEYCKDQST
TPAFWEDIIVDDILNKDYEQQKFSKGINNLASGFHSPCFPQNLNQSSHQPKQQNQICNQN
HLGKPSESFTEPLGAGFEKLAESEDTDTDVDNKVSSDIGENNIISNILSLELDAWEDSLV
KLLGESDEPYTSFNAPALRKIQDKNQSRFSFARQDDSLNEASDLQQSFEITGHNPKCNSV
SGGLNGNRDMFAGKHPHTFPSSNSVLSDKFDGSPSLVPSKFSMAKAHASSPPGFAMSGRL
PPGFSRGRVEHGCNSPVEHLHLQYAPPSVNIGRIGGVEFRNPMVLDPSKGIVEERMNSAP
FNVRQTLIPQYSPNEDDARLKLLVQQSAASQNFRLTDHIGNRFSHQSDAYRTSSRFLDQF
QSNTPFSEQLHSQQFSSNIPISNNQWGSWNDSKYFSGLSMSEVLNNEIGGFNNFLPSYEN
IKF
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacaaaggaggaaaatcatgtccgatatgcaccgaggagatggacttgactgat
cagcagctgaagccatgcaaatgtggctatgagatctgtgtatggtgctggcatcatata
atggaaatggctcagaaagatgaaactgagggtcgttgtcctgcctgccgttcaccttat
gacaaagaacgcatagtggcaatggcagctaactgtcgaagattggttgccgaaatgaat
tccaagcatagaaagaagatacagaagttaaagcctaaatcatcagaaggaaggaaacat
cttactgatgttagagtcattcagcgcaaccttgtgtacataattggactgcctcttaat
cttgcagatgaagatctacttcagcgtagggagtactttggaaggtatggaaaggttttg
aaagtttcaatatctcgtacagcaacaggcattattcaacattctgcaaacaatagctgt
tgtgtgtatataacttactcaaaagaatctgaagcagttcgatgtattcaatccgttcat
ttttttgtattagaaggtagatcattgagggcttgttttggaaccacaaagtattgccat
gcatggctaagaaatgtgccttgcaacaatagagaatgcttatatctacatgatcatggt
tctcacgaagatagctttaccaaagatgaattagtattggcatttgcaaggagtagagtc
ctacagatcattggtgctacaaataatttaaatcgtccttcagggagtgtcttacctcca
ccaccagatgatcctaggcacatgccatcagccaccaaagtagtgtccaaaagtccttta
gataaccagattaaaggatcctgttcaagcattggagctgccaattcaacagcacttcca
gcagcaaactcttgggttaggtgtgtgtctggcagtcttccacaggatactagttcctcg
agttctagtaatctggccaatagaaagattgaagcatctaatgatcccctagcccttacg
ccaggtgttgcttgcactgaaaagtctattcttgatacaataaaatcaggggaagatgag
agtagctctgatgtgcattccaatagtgtgtttttaccttcagagttgaacaaacatcac
agtggcgggaattctcaaacatcttctgtgggcattgatcaagagatggttgtaccttct
gcgagaacaagcttcctggagatctccagaccacatgatttcaatattaacagggcaatt
tccaatcgagatgtgcatggcttatgttcagggttatcatctgtcagcatcaacagtcat
cttgaaggttcagatttcactcgtggttcagacagaatactttctactcataactcgatc
aattcctctttagggaaccatgtgcatcaagataatgagtattgtaaagatcaatcaacc
acaccagctttttgggaagatataattgtggatgatatactaaataaagattatgaacaa
cagaaattcagcaaaggtattaataatttagcatctgggttccattcaccttgctttcct
cagaatctaaaccaatcaagtcatcaaccgaagcagcaaaatcaaatttgtaaccagaat
catttggggaaaccttctgaatctttcactgaaccattgggggcaggattcgagaagctt
gcggagagtgaggatactgatacagatgttgataacaaggtttcttcagacataggagaa
aacaacattatatctaacattttgtctttggaactagatgcatgggaagattcactagtt
aaattgttgggtgaaagtgatgaaccatacacatcctttaatgcacctgctttgcggaaa
attcaagacaagaatcagtccagattttcatttgccagacaggatgattccttgaatgag
gcatctgatttgcagcaatcattcgaaattactggacataatcctaaatgtaattctgtt
tctggtggtttaaatggaaacagagatatgtttgccgggaaacacccacatactttccca
tcaagcaattctgtgctatctgataaatttgatggaagtccgtctttggtgccctctaaa
ttttccatggcaaaagctcatgcttcaagcccacctggatttgcaatgtccggcagatta
cctcctgggttttcacgtgggagagtggaacatggttgtaatagtcctgttgaacatttg
catctgcagtatgctcctccatctgtaaatatcggcaggataggaggtgttgaattcaga
aatcctatggtattggatcctagtaagggcatagtagaagaaaggatgaatagtgcacct
tttaacgtgaggcagactttaattcctcaatatagtcctaatgaagatgatgctaggctt
aagctgttagtacaacaatccgcagcttctcagaattttagacttacagatcatattgga
aataggttttcccatcaaagtgatgcttatagaacttcttcgaggtttcttgatcagttt
cagtctaacacaccattttctgaacaattgcattctcaacagttcagtagtaatattccc
atatcaaataaccagtggggaagttggaatgattccaagtatttcagtggcctgtctatg
tctgaagtattgaataatgaaatagggggatttaacaatttcttgcctagttatgagaat
atcaaattttaa
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