Cicer arietinum (chickpea): 101515779
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Entry
101515779 CDS
T02819
Name
(RefSeq) putative transcription elongation factor SPT5 homolog 1
KO
K15172
transcription elongation factor SPT5
Organism
cam
Cicer arietinum (chickpea)
Pathway
cam03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cam00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
101515779
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cam03021
]
101515779
03019 Messenger RNA biogenesis [BR:
cam03019
]
101515779
Transcription machinery [BR:
cam03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
101515779
RNA polymerase I system
101515779
Messenger RNA biogenesis [BR:
cam03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
101515779
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KOW1_SPT5
KOW2_Spt5
Spt5-NGN
KOW4_SPT5
KOW
KOW6_SPT51-2
KOW7_SPT5
KOW5_SPT5
KOWx_SPT5
Spt5_N
GPKOW_C
DUF4438
Motif
Other DBs
NCBI-GeneID:
101515779
NCBI-ProteinID:
XP_004502577
UniProt:
A0A1S2YBZ9
LinkDB
All DBs
Position
5:67569850..67577316
Genome browser
AA seq
1038 aa
AA seq
DB search
MSHRGMDRDEDDDEEYEEEQVAEYDDEEADEEVEEKGGGRKRRRSGFIDDDAEEVDEEEE
EEDDDDDDYDAGGRGTRKRKQYKRASASNYFDEEAEVDTDEEEEEEEGEDGFIDETDADL
PEEDDTRGRSRPRLPPHQEDHEDLEAMARSIQERYGKQRVADYDEETTDVEQQALLPSVR
DPKLWMVKCAIGRERETAVCLMQKYIDKGSELQIRSAVALDHLKNYIYVEADKEAHVREA
CKGLRNIFGQKITLVPIREMTDVLSVESKAIDLARDTWVRMKIGTYKGDLAKVVDVDNVR
QRVTVKLIPRIDLQALANKLEGREVVKKKAFVPPPRFMNVDEARELHIRVEHRRDAYGER
FDAIGGMMFKDGFLYKTVSIKSISAQNIKPTFDELEKFRKPGESGDGDVVSLSTLFANRK
KGHFMKGDAVIVIKGDLKNLKGWVEKVDEDNVHIRPEIKGLPKTLAVNEKELCKYFEPGN
HVKVVSGAQEGATGMVVKVEQHVLILISDTTKEHIRVFADDVVESSEVTTGVTRIGDYEL
RDLVLLDNLSFGVIIRVESEAFQVLKGVPDRPEVVLVKLREIKCKIDKKISVQDRFKNTV
SSKDVVRIVEGPCKGKQGPVEHIYRGILFIFDRHHLEHAGFICAKAQSCVVVGGSRSNGD
RNGDAYSRFPSLRTPPRIPQSPKRFPRGGPPFDSGGRHRGGRGHDGLSGATVKVRQGPYK
GYRGRVIEVKGTFVRVELESQMKVVTVDRNHISDNVAVTPHRETSRYGMGSETPMHPSRT
PLHPYMTPMRDPGATPIHDGMRTPMRDRAWNPYAPMSPPRDNWEDGNPGSWGASPQYQPG
SPPSRPYEAPTPGAGWASTPGGNYSEAGTPRDSSAYGNAPSPYLPSTPGGQPMTPNSASY
LPGTPGGQPMTPGTGGLDMMSPVLGGDNEGPWLMPEILVNVHRAGDESVGVIKEVLPDGS
YKVALGSSGNGETITALHSEMEAVVPRKSDKIKIMGGALRGATGKLIGVDGTDGIVKVDD
TLDVKILDLVILAKLAQP
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atgagccatcgaggaatggaccgcgacgaagacgacgacgaagagtacgaagaggagcag
gtcgccgaatacgacgacgaggaagcggatgaggaagtggaggagaaaggcggtggaagg
aaacggagacgatctggtttcatcgacgatgacgctgaagaggtggacgaggaggaagag
gaagaggatgacgacgacgatgattatgacgctggtggccgaggtactcgtaaacgtaag
cagtacaaaagggcttccgcttcaaattatttcgacgaggaagccgaggttgatacggat
gaagaggaggaagaggaagaaggcgaagacggcttcattgatgaaactgacgctgatctg
ccggaggaagatgacactagaggtaggtcacgcccccgactgccacctcaccaagaagat
catgaagatcttgaagcaatggcaagaagtatacaagaaagatatggaaagcagcgagta
gcagattatgatgaagaaactacagatgtagaacaacaagcacttttgccatctgtgaga
gatccaaaactgtggatggtcaaatgtgcgattggccgtgaacgtgaaacagctgtttgc
ctcatgcaaaagtacatagataaggggtctgaattgcaaatccgatcagctgttgctctt
gatcatctaaaaaactatatatacgtggaagcagataaagaagctcatgttagagaggct
tgcaaaggtcttcgcaatatatttggccaaaaaataacccttgttccaataagagaaatg
actgatgttctttcagttgaaagcaaagcaattgatcttgctagagatacatgggtcaga
atgaagattgggacatacaagggggacctcgccaaagtagtggatgttgataatgtgcga
cagagggttactgttaaattaattccaagaatagacttacaggctcttgcaaacaaattg
gaaggtagagaagttgtgaaaaagaaagcatttgttccccctcctcgtttcatgaatgtt
gatgaagctagggaactacatattcgcgtggagcatagacgtgatgcctatggggaacgg
tttgatgccattggaggtatgatgttcaaagatggattcttatacaaaactgtatctata
aaatccatcagcgcccagaacatcaaacctacgtttgatgaactcgaaaaatttcgtaaa
ccgggtgagagtggagatggtgatgtagtcagtctgtcaactctgtttgcaaacagaaag
aaagggcatttcatgaagggtgatgctgttattgtcatcaagggcgatttgaagaatttg
aagggatgggtggagaaagtggatgaagataatgttcatataagaccagaaataaaaggt
cttcctaaaactcttgcagtaaatgaaaaggaactttgtaaatattttgaacctggaaac
catgttaaagttgtttctggtgctcaagagggtgctactggcatggttgttaaggtggag
cagcatgtcctgattttaatatctgatactacaaaggagcatatccgtgtttttgcagat
gatgttgtagagagctctgaagtaaccactggagtgacaagaattggggactatgaactt
cgtgatcttgtattgctagacaatttgagttttggtgtaattatccgtgtagaaagtgag
gcatttcaggttcttaagggggttcctgacagacctgaagttgtgcttgttaaattgaga
gagatcaagtgtaagatagataagaaaataagcgtgcaggataggtttaaaaatacagta
tcatcaaaagatgttgtgcggattgttgagggtccctgcaaaggcaaacaaggtcctgtg
gagcacatatatagaggaatattgttcatctttgatcgccatcatcttgaacatgcagga
tttatatgtgctaaggctcaatcgtgtgtagttgtgggaggttcacgctccaatggcgac
agaaatggtgatgcatactccagattccccagtcttcgaaccccacctcgtattccacag
tccccaaagaggtttcctcgaggagggcctccttttgattctggagggaggcatcgggga
ggaagggggcatgatggtttgtctggtgcaactgttaaagtacgccagggtccctataaa
ggttatcgtggacgtgttatagaagttaaaggaacatttgttcgggttgaattagagtcc
caaatgaaggttgtaacagttgaccgcaatcatatatctgacaatgtggctgttacccca
caccgtgaaacatctcgatatgggatgggaagtgaaaccccaatgcatccttctcgaact
cctttgcatccatacatgactccgatgagagatcctggagcaacaccaattcatgatgga
atgaggacccctatgcgtgaccgagcttggaatccttatgcaccaatgagtcctcctagg
gataactgggaagatggaaatccaggctcttggggagccagtccacagtaccagccagga
agccccccttcccggccatatgaagccccaactcctggtgctggttgggctagtactccc
ggtggcaattatagtgaggctggaacaccacgggacagttctgcctacggaaatgctcca
agcccatatttaccatcaacaccaggtgggcagcccatgacaccaaattctgcgtcttat
cttcctggcacccctggaggacagccaatgactccaggaactggtggtttggacatgatg
tccccagtattaggtggggacaatgaagggccttggcttatgccagaaatattggtcaat
gtacacagagctggagatgagtctgttggagttataaaagaagttcttccggatggttct
tacaaggtagctcttgggtccagcggaaatggtgaaaccataacggcccttcattctgaa
atggaggctgtagtgccaagaaaatccgataaaataaagataatgggcggggcgttgcgt
ggtgccactggcaagttgattggtgtagatggcactgatggcattgtaaaagtagatgac
acattggatgtgaagattttagacttggttattttggcaaaattagcccaaccatga
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integrated database retrieval system
