Cicer arietinum (chickpea): 105852410
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Entry
105852410 CDS
T02819
Name
(RefSeq) probable pre-mRNA-splicing factor ATP-dependent RNA helicase
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
cam
Cicer arietinum (chickpea)
Pathway
cam03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cam00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105852410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cam03041
]
105852410
03009 Ribosome biogenesis [BR:
cam03009
]
105852410
Enzymes [BR:
cam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
105852410
Spliceosome [BR:
cam03041
]
Complex A
U2 snRNP components
U2 related factors
105852410
Complex B
105852410
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
105852410
Ribosome biogenesis [BR:
cam03009
]
Eukaryotic type
90S particles
Helicases
105852410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
AAA_22
AAA_19
ResIII
SRP54
ABC_tran
nSTAND3
Flavi_DEAD
T2SSE
AAA_30
AAA_7
NACHT
FtsK_SpoIIIE
RsgA_GTPase
AAA_29
AAA_33
DNA_pol3_delta
Fructosamin_kin
AAA_11
TsaE
UvrD-helicase
AAA_16
Motif
Other DBs
NCBI-GeneID:
105852410
NCBI-ProteinID:
XP_012573025
LinkDB
All DBs
Position
Ca6:complement(48255298..48256938)
Genome browser
AA seq
247 aa
AA seq
DB search
MGTERKRKVSLFDVVDDSAAKMVRTNGVSIGNSLINRWNGKAYSQRYYKILEKRKTLPVW
HQKEDFLQVLRDDQTLILVGETGSGKTTQIPRIVLEAVKLETADKHKKMMIACTQPRRVA
AMSVSRRVAEEMDVSIGEEVGYSIRFEDCNSARTVLKYLTYGMFFREAMTDPLLKRYKLI
ILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFFGAPLMKVPRRLH
PVEIFYT
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgggtacggagaggaagaggaaggtgagtttattcgacgtcgtggacgactctgcagct
aagatggtgagaactaacggcgtttcaatcggtaacagccttataaaccgatggaacggt
aaagcttactctcaaagatattataaaattttggagaagaggaaaaccctacctgtttgg
caccagaaagaggatttcttgcaggttttgagggatgaccagactttgattctcgttggt
gagactggtagtggaaaaaccacacagatccctcggattgttttggaagctgtcaaatta
gagacagctgataaacacaagaagatgatgattgcatgcactcaacctcgtagagtggct
gcaatgtctgtttctcgtcgtgtggccgaagagatggatgtgagtattggtgaagaggtt
ggttatagcatcagatttgaagattgtaatagtgcaaggactgttttgaagtatctaaca
tatggtatgttttttagagaagcaatgacggatccacttttgaaacggtacaaattaatt
attcttgatgaggcacatgaaaggactttggctactgatgtgctatttggccttctaaag
gaagttcttaaaaacagacctgacttgaagttggttgttatgagtgccacacttgaagct
gaaaagtttcagggctatttttttggagccccacttatgaaagttcctagaaggctacat
cctgtggaaatcttttatacttag
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integrated database retrieval system
