Citrobacter amalonaticus Y19: F384_03565
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Entry
F384_03565 CDS
T03934
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
cama
Citrobacter amalonaticus Y19
Pathway
cama03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cama00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
F384_03565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cama03400
]
F384_03565
DNA repair and recombination proteins [BR:
cama03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
F384_03565
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
F384_03565
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
SBDS_domain_II
AAA_30
IF2_N
UB2H
PRDA1_C
AAA_22
DUF4686
Motif
Other DBs
NCBI-ProteinID:
AKE58281
UniProt:
A0A0F6TTF5
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All DBs
Position
791343..793364
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AA seq
673 aa
AA seq
DB search
MSKAFKLNSAFKPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPT
MVLAPNKTLAAQLYGEMKEFFPDNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVIVVASVSAIYGLGDPDLYLKMMLHMTVGMIIDQRAILRRLAELQ
YTRNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFDEEVERLSLFDPLTGQVESTISR
YTIYPKTHYVTPRERIVQAMEEIKVELAERRKVLLANDKLLEEQRLSQRTQFDLEMMNEL
GYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVVDESHVTIPQIGGMYRGDRARKET
LVEYGFRLPSALDNRPLKFEEFEALAPQTIYVSATPGNYELEKSGGDVVDQVVRPTGLLD
PVIEVRPVATQVDDLLSEIRKRAQINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI
DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNINGKAILYGDKITASMAKAISETERRREKQQQYNEEHGIIPQGLNKKVVDILALG
QNIAKTRAKGRGKSRSAAKSDVVELDMTPKALQQKIHELEGQMMQHAQNLEFEEAAQIRD
QLHQLRELFIAAS
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagcgttcaaactgaattccgcatttaaaccttccggcgatcagcccgaggcc
atacgacgtctggaagagggactggaggacggcctggcgcatcagacgctgcttggcgta
acggggtcggggaaaacgttcaccatcgccaatgtgattgcggatctacaacgcccgacg
atggtgctggcacccaacaaaacgttggcggcacagctgtatggggaaatgaaagagttt
ttcccggataacgccgtcgagtatttcgtctcctactacgactactatcagccggaagcg
tacgttcccagttctgacacctttatcgaaaaagatgcgtcggtaaacgaacacattgaa
cagatgcgtctgtccgccaccaaagcattactggagcgccgtgacgtgatcgtcgtggcc
tccgtttccgctatctatggtctgggcgatccggatttatacctgaagatgatgctgcac
atgacggtgggcatgatcatcgatcagcgcgccattctgcgtcgactggctgaactgcaa
tatacccgcaacgatcaggctttccagcgcgggaccttccgcgtgcgcggcgaagtgatc
gacatcttcccggcggaatccgacgacattgcgctgcgtgtggagctatttgacgaagag
gttgagcgtctgtcgctgtttgatccgctgaccgggcaggtggagtccaccatttcgcgc
tacaccatctacccgaaaacgcactacgtgaccccgcgtgagcgcattgtgcaggcgatg
gaagagatcaaagtcgaactggctgaacgacgcaaggtcctgctcgccaatgacaaactg
ctggaagagcagcgtctgagtcaacgaacccagtttgatctggagatgatgaacgagctg
ggctactgctcggggattgaaaactactcgcgctttctgtcaggacgcgggccgggtgag
ccaccgccgacgttgtttgactatctgcctgccgacggtttgctggtggtggatgagtcc
cacgtgactatcccgcagattggcgggatgtaccgtggtgaccgtgcgcgtaaagagacg
ctggtggagtacggtttccgtctgccgtcggcgctggataaccgcccgttaaagttcgaa
gagtttgaagcgctggcaccacagaccatctacgtgtctgcgacgccgggcaattacgag
ctggagaaatcaggcggcgatgtggttgatcaggtggtgcgtccgacagggttgctggat
ccggtgattgaagtgcgtccggtggcaacgcaggtggacgatctgctttctgagatccgc
aagcgtgcgcagatcaacgagcgcgtgctggtgaccacgctgaccaaacggatggcggaa
gatctcaccgaatatctggaagagcacggcgagcgggtgcgctatctgcactcggacatc
gataccgtggagcgtatggaaatcattcgtgacctgcgtctgggcgagtttgatgtgctg
gtggggatcaacctgttgcgcgaaggtctcgacatgcctgaggtgtcgctggtggcgatt
ctcgacgccgacaaagaagggttcctgcgttccgaacgttcgctgattcagaccatcggt
cgtgcggcgcgtaacattaacgggaaggcgattctctacggcgacaaaattacggcctca
atggcgaaggcgatcagcgaaaccgaacgccgtcgcgagaaacagcagcagtacaacgaa
gagcacggcattatcccgcagggcctgaataaaaaagtggtcgatattctggcgctggga
cagaacattgcgaaaaccagggcgaagggcagaggtaagtcacgttccgcggcgaagtcg
gatgtggtcgaactggacatgacgccaaaagcgctgcagcagaagattcacgagctggaa
gggcagatgatgcagcatgcccagaacctggaattcgaagaagccgcgcagattcgcgat
cagttgcatcaactgcgtgaactgtttatcgccgcctcgtag
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