Citrobacter amalonaticus Y19: F384_03655
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Entry
F384_03655 CDS
T03934
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
cama
Citrobacter amalonaticus Y19
Pathway
cama03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cama00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F384_03655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cama03019
]
F384_03655
Enzymes [BR:
cama01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
F384_03655
Messenger RNA biogenesis [BR:
cama03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
F384_03655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
UvrD-helicase
P-loop_SecA
Utp25_C
DUF6482
Motif
Other DBs
NCBI-ProteinID:
AKE58299
UniProt:
A0A0F6TTK4
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All DBs
Position
808665..810041
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AA seq
458 aa
AA seq
DB search
MSFDSLGLNPDILRAIAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL
QHLITKEPHSKARRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVIFGGVSINPQMM
KLRGGVDVLVATPGRLLDLEHQNAVKLDQIEILVLDEADRMLDMGFIHDIRRVLAKLPAK
RQNLLFSATFSDEIKALAEKLLHNPLEIEVARRNTASEQITQHVHFVDKKRKRELLSQMI
GQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV
ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKMLRDI
EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRSGGGGGRGRGQGQGQGAGRAQQPRRQ
DGGAPKAGAKPSRRTGDAKPAGEKPRPPRRPRRITPVQ
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgattccctgggtttgaaccctgatattctgcgcgccattgccgagcagggt
taccgtgaacctacccctattcagcaacaggcgatccccgccgtgctggaaggtcgcgac
ctgatggcgagtgcgcagaccggtaccggtaaaacggcgggctttacgctgccgctgtta
cagcaccttattaccaaagagccgcacagcaaagcacgtcgcccggtacgggcgctgatc
ctgacgccgacgcgtgaactggcggcgcagattggtgaaaacgtccgtgattacagcaag
tatctgaacatccgttcgctggtgatttttggcggcgtgagcattaacccgcagatgatg
aaactgcgcggcggcgtcgatgtgctggtggcaacgccggggcgcttgctggatctggaa
caccagaacgcggtgaaactggaccagattgagattctggtgctggatgaagcggaccgt
atgctggatatgggctttattcacgacattcgccgtgtgttagcgaaactgccggcgaag
cgtcagaacctgctgttctctgcgacattctctgatgagataaaggcgctggccgaaaag
ctgctgcataacccactggaaattgaagtggcgcgccgcaacacggcgtcagaacagatt
acgcagcacgtgcatttcgtggataagaaacgcaaacgtgagctgttatcgcagatgata
ggccagggtaactggcagcaggtgctggtgtttacccgtaccaaacacggcgccaatcat
ctggcggagcagttgaacaaagatggcattcgcagtgcggcgatccacggcaacaagagt
cagggggcgcgtacccgtgcgctggctgatttcaaatccggtgacattcgcgtgctggtg
gcaacggatattgccgcgcgtggtctggatatcgaagaactgccgcacgtagtgaactac
gagctgccgaatgttccggaagattatgtacaccgtatcggtcgtaccgggcgtgctgcg
gctaccggtgaagcgctgtcgctggtttgtgttgatgaacacaaaatgctgcgtgatatc
gaaaaactgctgaaaaaagagatcccgcgcattgccattccaggctacgagccggatcca
tcgattaaagctgagccgatccagaatggtcgccagcagcgtagcggtggcggcggcggt
cgaggccgtggtcaggggcaagggcagggcgcgggtcgcgctcagcagccacgtcgtcag
gacggcggtgcgccaaaagccggcgctaaaccttcacgccgcacaggcgatgcgaaaccg
gctggcgaaaaaccgcgtccgccgcgtcgtccacgcagaattacgccagtgcaataa
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