KEGG   Citrobacter amalonaticus Y19: F384_06450
Entry
F384_06450        CDS       T03934                                 
Name
(GenBank) ATP-dependent helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
cama  Citrobacter amalonaticus Y19
Brite
KEGG Orthology (KO) [BR:cama00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cama03400]
    F384_06450
Enzymes [BR:cama01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     F384_06450
    5.6.2.6  RNA 3'-5' helicase
     F384_06450
DNA repair and recombination proteins [BR:cama03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    F384_06450
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr DEAD WHD_2nd_Lhr WHD_3rd_Lhr WHD_4th_Lhr Helicase_C ResIII AlkZ-like AbiEi_4 PhoH
Other DBs
NCBI-ProteinID: AKE58815
UniProt: A0A0F6RET8
LinkDB
Position
complement(1400298..1404977)
AA seq 1559 aa
MSANNASPPLPDIFSQATRDWFTSAFQHPTLVQSQTWAVTAANQHALVIAPTGSGKTLAA
FLYALDRLFREGEEKHATPPSGKEKKVTRILYISPIKALGTDVQRNLQIPLQGISEERKQ
CGAPEVAIRVGIRTGDTPPQERAKLSRHPPDILITTPESLYLMLTSRARESLRGVETVIV
DEVHAVAGTKRGAHLALSLERLDTLLAGSAQRIGLSATVRSVTEVAAFLGGDRPVTVVNP
PATRHPDIHIVAPVANLDDVLADNSDSNDAIHKGREGSIWPRIEAGILDQILRHRSTIVF
TNSRGLAEKLTARLNELYLSRQQAFPEPQAEPVHYDSSTGSTSNRAQGVEEYIARSHHGS
VSKEQRAVTEHALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRASH
QVGGVSKGLFYPRTRRDLIDSAVIVECMYAGQLETLTPPRNPLDILAQQTVAAVSMDPVN
VDDWYALVRRASPWKDLPREAFDATLDMLAGRYPSGDFAVFRPRIIWNRETGLLTARPGA
QLLAVTSGGTIPDRGMFSVLLPEGDEQAGSRRVGELDEEMVYESRVNDIITLGASSWRIQ
QITRDQVIVVPAPGRSARLPFWRGEGVGRPAELGERIGDFIHTLSDDNAELQLSPRLRDD
NVLSNIKGLIDDQKNATGVLPWSRHLVLERCRDEMGDWRVILHSPYGRRVHAPWALAIAG
RLHALWGADASIVASDDGIVARIPDSDGKLPDAAIFLFDPEKLLRIVREAVSSTALFAAR
FRECAARALLMPGRTPGRRSPLWQQRLRASQLLEIAAGYPDFPIILETARECLQDVYDLD
ALEQVIRRLNTGEIQISEVTTPTPSPFATDLLFGYVAEFMYATDVPLAERRASVLALDSE
LLGSLLGQGDPLELLDPEIIRQVEDELQRRAAGRKAQGMEGVYDLLRELGPMTIEDIALR
HEATIADIRGWLDNLSADKRIFPVVIADTTQMACMDDAARLRDALAVRLPATLSPAWLHP
VNTPLRDLFMRFSRTHTLFTGAQIAQAFGLGVAVADDLLRQLRDEGVLIQLRTGASSTPD
DARSSTWVNEDIFHRLRIRSLHAAREATRPVPATSYTRLLLERQGLISPADGSPARSPAS
SAGTLEGSDGVTRVIEQLAGVGLPASLWESQIFPARVRDYSPDMLDELLATGEVIWSGQQ
KLGEDDGRVVLHLRDYLAETLSPPSGDSEALSDLQRAILDVLSGGGAWFAQQLSALIQAR
TQRSGDDAWITPATLHEALWGLVWQGYITTDIWAPLRGLSRTVAASRQPSRRSPRMRRGR
PIYASPRPASVSVPVSYTTPALAGRWSLLPRETLNDTERMLACAENMLDRYGVIGRQAVM
AENVPGGFPAMQTLCRSMEDSGRILRGRFVEGMGGAQFAERHTIDRLRDLTSSTSEHQAF
TAVALSANDPANPWGALLPWPTHPSSLAPGRRNGAFVVISAGQLRLYLAQGGKKMMVWGE
NEEMPSPEIFRALASALRREPRLRFTLSEVNDKPVRQTTLFTLLREVGFSSSPQGLDWG
NT seq 4680 nt   +upstreamnt  +downstreamnt
atgtcagcaaacaatgcgtcgccgccgctgccggatattttttcacaggcgacccgcgac
tggtttacctcggcatttcagcaccccacgctggtgcaatcacaaacgtgggccgttacc
gcggcaaatcagcatgcgctggtgatagccccgaccggttcggggaaaacccttgcggcg
tttctctacgcactggatcgcttatttcgtgaaggcgaggaaaaacacgcgacgccgccc
tccggcaaagaaaagaaagtcacccgaatcctctatatttccccgattaaagccctgggc
acggatgtccagcgcaatctgcaaattccccttcaggggattagcgaagaacggaagcaa
tgcggcgcgcctgaggtggccattcgggtcggtatccgtacaggcgatacaccgcctcag
gagcgagcgaagctcagtcgtcatccgcccgatattctgatcaccacgccggagtcgcta
tatctgatgctcacctcgcgcgccagagagtcgctgcgcggggttgaaacggtgatcgtc
gatgaagtgcatgcggtggcaggcacaaaacgtggtgcgcacctcgcgctcagtcttgaa
cgactggatacgcttctggcgggctcggcgcagcgcattggtctgtcggcgacggtgcgt
tccgttactgaagttgccgcttttctgggaggcgatcgtccggttaccgtcgtcaatccc
cccgccacccgtcacccggacatccacatcgtcgcccctgtcgccaatctcgatgacgtg
ctggccgataacagcgacagcaatgatgccattcacaaaggcagagaaggttccatctgg
ccgcgcattgaagccggtattctcgatcaaatccttcgccatcgctccacgattgtcttc
accaactcgcgcgggctggcggaaaaactgaccgctcgcctgaacgaactgtatctttcg
cgccagcaagcgttccctgaaccgcaggcggaaccggtgcactatgactcgtcaaccggt
tccaccagcaatcgggcgcagggcgtcgaagaatacattgcccgttcacatcatggttcg
gtttccaaagagcagcgggccgtcacggagcatgccctgaaatccggtgaacttcgctgt
gtggtggccacctcgagtctggaactggggatcgacatgggcgcggttgatctggtgatt
caggtggcaacgcccctttccgtcgccagcggcctgcagcgcatcgggcgagccagccac
caggtcggcggcgtctcgaaggggctgttttatcccagaactcgccgggatctgattgat
tctgcggtgattgtcgagtgcatgtacgccgggcaactggagaccctgacgcctccgcgt
aacccgctggatattctggcgcaacaaaccgttgccgccgtttcaatggatcccgtcaat
gtcgatgactggtatgccctcgtccgtcgggcttccccgtggaaagatctgccaagagag
gcgtttgacgccacgctggatatgctggcgggacgctatccctctggcgattttgcggta
ttccgaccacgtattatctggaaccgcgaaaccgggctattaacggcccgtcccggcgca
caacttctggccgtgaccagcggcggtaccattccggaccgtggcatgttcagcgtactg
ctccccgaaggggatgaacaggcaggatcgcgacgcgtgggcgaactggatgaagagatg
gtgtatgagtctcgcgtcaacgacatcattacgcttggtgccagttcgtggcgtattcaa
cagatcacccgcgatcaggttatcgtcgtccctgcgccgggacgctcggccagacttccg
ttctggcgcggcgaaggcgtcgggcggccagcggaactgggggaacgtattggcgatttt
atccataccctgtccgatgacaacgcggaactgcagctctcccctcgcctgcgcgatgac
aatgttctgtcaaatatcaaagggttaattgacgatcaaaaaaatgccacgggtgtactc
ccctggagtcgccatctggtacttgaacgctgtcgagatgaaatgggtgactggcgagtc
attctgcattccccatacggccgtcgggtgcacgccccctgggctctggcgattgccgga
cgtctccacgcactgtggggggctgatgcgtcgattgttgccagcgatgacgggattgtc
gcccgcattccggacagcgacggaaagctgccggatgccgccatttttctgttcgatccg
gaaaaactgttgcgcattgtccgggaagccgtcagcagcacggcactgtttgccgcccgc
ttcagagaatgcgccgctcgcgccctgctgatgcctggccgcacgccgggacgccgctct
ccgctctggcagcagcgcctgcgcgcaagccagcttctggaaatcgctgcgggctatcct
gatttccccatcattctggaaactgcccgcgagtgcctccaggacgtctacgatctcgac
gcgcttgagcaggtcatacgccgactgaacaccggcgagatccagatttctgaagtcacc
acgccaaccccttcgccgttcgcgaccgatctgttatttggctatgtcgcggaatttatg
tatgccaccgatgtgccgctggcggagcggcgggcctcggtactggcgctggacagcgaa
ctgctgggcagcctgttaggccagggcgatccgctggagttgctcgacccggagatcatc
cgccaggttgaggatgaacttcagcgacgggctgcgggcagaaaggcccaggggatggaa
ggcgtttacgatttgctgcgcgaactggggccaatgaccatcgaggatattgccctcaga
cacgaggcgacgatcgctgacatcaggggctggctcgataacctgtccgctgacaagcgt
attttcccggttgtcattgcagacacgacacagatggcctgcatggatgacgcagccagg
ctacgtgatgcgctggctgtccgcctgcctgcgaccctttcgcctgcatggttgcatccg
gtgaatacaccgctgcgggatctcttcatgcgtttcagccgcacccatacgctctttacc
ggcgcgcagattgcgcaggcgttcgggttgggtgtagccgtcgccgatgacctcctgcgc
cagttacgcgatgagggcgtcctgattcaactgcgtacaggggcgtcatccactcccgac
gacgcgcgatcgtcaacgtgggtgaatgaagatatatttcatcggctgcgcatccgctcg
ctgcatgccgccagagaggcaacccgcccggttccggcaacgagctacacccgcctgctg
ctggaacgtcaggggctcatttcacccgccgacggcagcccggcacgttcccctgcgtcc
tctgcgggaacgctggagggaagtgacggtgtcacgagagttattgaacaacttgccggc
gtcggcctgcccgcctcactgtgggaaagtcagattttccctgcccgggtccgcgattat
tcaccggacatgctcgatgagctgctggcgaccggtgaagtcatctggtcaggacaacag
aaactgggtgaagatgacggacgggtggtgctgcatttacgggattatctggcggagacg
ctttctccgccatccggtgacagcgaggcgctttcagacttacagcgcgcgattttagac
gtcctctcaggcggcggcgcatggtttgcgcagcaactcagtgcgttgattcaggcccgg
acgcaaaggtctggcgatgatgcgtggattacgccagcgactctgcatgaggccctgtgg
gggctggtctggcaagggtacatcacgaccgatatctgggctccgctgcgtggtctgtcg
cgcacggtcgccgcatcgcgccagccgtctcgacgctcgccgcgtatgcgtcgtggacgc
ccgatctacgcctcaccgcgtcccgcgtctgtttccgtaccggtttcttacaccacccct
gcgctggccgggcgctggtcactactgccgcgagagacgttaaatgataccgaacgaatg
ttggcctgcgcggagaatatgctcgatcgctacggtgtgattggtcggcaggcggtgatg
gctgagaatgtccctggagggtttccagccatgcagacactgtgtcgaagcatggaggat
tcggggcgtattctacgtgggcgtttcgttgaaggcatgggcggtgcgcagtttgccgag
cggcatactatcgatcgtcttcgcgatcttacctcgtcgacgtctgaacatcaggctttt
acggcggtggcgttatccgcgaacgacccggccaatccctggggcgcactgctgccgtgg
ccgacgcatccgtcatctctggcccctggacgacgtaatggcgcatttgtcgtcatttct
gccggtcaattgcggctgtatcttgctcagggtgggaaaaagatgatggtctggggcgaa
aatgaggagatgccctcaccggagattttcagggcgctggcaagtgccttacgccgtgaa
ccgcgacttcgttttacgctgtcggaagtcaacgataaaccggtccggcaaaccacactg
tttaccctgctgcgggaggttgggttttccagttcgccacagggactggactggggataa

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