Citrobacter amalonaticus Y19: F384_13795
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Entry
F384_13795 CDS
T03934
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
cama
Citrobacter amalonaticus Y19
Pathway
cama03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cama00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
F384_13795 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cama03400
]
F384_13795 (xseA)
Enzymes [BR:
cama01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
F384_13795 (xseA)
DNA repair and recombination proteins [BR:
cama03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
F384_13795 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
OMPdecase
Motif
Other DBs
NCBI-ProteinID:
AKE59554
UniProt:
A0A0F6TW02
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All DBs
Position
2983392..2984756
Genome browser
AA seq
454 aa
AA seq
DB search
MLSSQTSAIFTVSRLNQTVRLLLEQEMGQVWISGEISNFSQPSSGHWYFTLKDDTAQVRC
AMFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAK
LQAEGLFDQQHKQPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDD
APGQIVRAIELANARQECDVLIVGRGGGSLEDLWSFNDERVARAIFASAIPVVSAVGHET
DVTIADFIADLRAPTPSAAAEMVSRNQQELMRQILSAQQRLGMAMDYFLANRSRRFTQIY
HRLQQQHPQLRLARQQTALERLHQRMNVAIDSQVKRTSQRQSRLVQRLNQQSPQPRIHRA
QTRIQQLEYRLAQHVRSRLSSTRERFGNAVTHLEAVSPLSTLARGYSVSTATDGKVLKKV
KQVKAGDVMTTRLEDGWVESQITDIKPVKQRARK
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgttatcctctcagacctccgcaatttttactgttagccgcctgaatcagacggttcgt
ctgctgctggaacaggagatgggacaggtctggatcagcggtgagatttccaatttctcg
cagccgtcatcggggcactggtacttcacgctcaaagatgacactgcgcaggtgcgctgt
gcgatgttccgcaacagcaatcgtcgggtgacctttcgcccccagcatggccagcaggtg
ctggttcgcgccaatatcaccctgtacgagccgcgcggcgactatcagattatcgtcgaa
agcatgcagcctgccggtgaaggtttgctccagcaaaagtatgaacagttaaaagccaaa
ctgcaggctgaagggctttttgatcagcagcacaagcaacctctcccctctcccgcccat
tgtgtgggggtgatcacctcgaagaccggggccgcactgcacgatattctccatgtactg
aaacgtcgcgatccctctttgccggtcattatctatccgaccgccgtccagggcgacgac
gcgccagggcagattgtccgggctattgaactggcgaatgcgcgccaagagtgtgatgtt
ctgattgtcgggcgcggcggcggttcactagaagatttatggagcttcaacgacgaacgc
gtcgcccgggctatttttgccagcgcgatccccgtcgtcagcgcggtcggccacgaaacc
gacgtgacgattgccgattttattgctgacctccgtgcgccaacgccttcggccgcggct
gaaatggtcagccggaatcagcaggagttgatgcgccagatcctgtccgcccagcagcgt
ctcggcatggcgatggattactttctggcgaaccgcagtcgccggttcacccagatttat
caccgcctgcaacagcagcatccgcagttgcgtctcgcccgtcagcagacggcgctggaa
agattgcatcagcgtatgaatgtggctatcgacagccaggtgaagcgtaccagccagcgc
cagtctcgcctggtgcaacgcctgaaccagcaaagccctcagccgcgcattcatcgggcg
caaacccgcattcagcaactggaatatcgtctggctcagcatgtacgttcacgtctcagc
tccacgcgtgaacgctttggcaacgcggtaacgcatctggaagccgtcagcccactctcg
accctggcgcgtggttacagcgtctctaccgccaccgatggcaaagtactgaaaaaagtg
aaacaggtgaaggcgggtgatgtgatgaccacccgactggaagacggctgggtggaaagc
cagatcaccgacatcaaaccggtgaagcagcgcgcccgcaagtaa
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