Citrobacter amalonaticus Y19: F384_15280
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Entry
F384_15280 CDS
T03934
Symbol
recD
Name
(GenBank) exonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
cama
Citrobacter amalonaticus Y19
Pathway
cama03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cama00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
F384_15280 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cama03400
]
F384_15280 (recD)
Enzymes [BR:
cama01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
F384_15280 (recD)
DNA repair and recombination proteins [BR:
cama03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
F384_15280 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
NAT10_TcmA_helicase
UvrD_C_2
Viral_helicase1
AAA_11
SH3_13
UvrD-helicase
AAA_22
SLFN-g3_helicase
AAA_16
nSTAND3
MukB
AAA_28
UvrD_C
FtsK_SpoIIIE
DEAD
CbiA
T2SSE
SRP54
TrwB_AAD_bind
NPHP3_N
AAA_7
NTPase_1
AAA
ATPase
Motif
Other DBs
NCBI-ProteinID:
AKE59824
UniProt:
A0A0F6TW78
LinkDB
All DBs
Position
complement(3319910..3321727)
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AA seq
605 aa
AA seq
DB search
MTLQKRLLEAVEQKQLRPLDAQFALAVTGEHEPAVTLAAALLSRDAGEGHICLPLARLAM
HADLPPLLAAWLSESGAPADWAECLLASDAVSRGERPSPMILHGDRLYLNRMWRNERTVA
RFFSEVNQPIAVDEVLLTQTLEALFPTTNEINWQKVAAAVALTRRISVISGGPGTGKTTT
VAKLLAALIQMAEGERCRIRLAAPTGKAAARLTESLGKALRQLPLTDEQKKRIPDEASTL
HRLLGAQPGSQRLRHHAGNPLHLDVLVVDEASMIDLPMMSRLIDALPPHGRVIFLGDRDQ
LASVEAGAVLGDICAWVNAGYTPERAQQLTRLTGMPVPAGRGNDAAMLRDSLCLLQKSYR
FGSDSGIGQLAAAINRGDKAAINRVFQQGFSDIDKRTLESSEDYTAMLEDALTGYGHYLQ
LLQTRAEPALIIQAFNEFQLLCALREGPFGVSGLNERIELAMQKKRKIHRLPHSRWYEGR
PVMIARNDSALGLFNGDIGVALDRGQGLRVWFAMPDGSIKSVQPSRLPEHETTWAMTVHK
SQGSEFEHAALVLPTQRTPVVTRELVYTAVTRARRRLSLYADERILASAVATRTERRSGL
STLFK
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
gtgacgctacaaaagcgattacttgaggccgtagagcagaagcaactgcgccctctggat
gcgcaatttgcgctggcggtgaccggcgaacatgaacctgcggtgacgctggcagcggcg
ttactcagtcgggacgccggagaagggcacatctgtttaccgctcgcccgactggcgatg
catgccgatctgccgcctctgctggcagcctggctgagtgagtcaggcgcaccggcggac
tgggcggaatgtctgctcgcatcggatgccgtcagtcgtggtgagcggccatcgccgatg
atcctccacggcgatcgactgtatctgaaccggatgtggcgcaacgaacgcacggtcgcc
cgtttctttagcgaggtgaatcaacccatcgcggtggatgaagtcttgctgacgcaaacg
ctggaagcgctgttcccgacgacaaacgaaatcaactggcaaaaagttgccgccgcggtg
gcgctgacccgccgcatttcggtgatttccggcggaccggggaccgggaaaacgacgacc
gtggcgaaactgctggcggcgctgatccagatggcggaaggcgagcgttgccgtattcgt
ctggcggcaccgacgggtaaagccgccgcgcgtctgacagagtctttaggcaaggcgcta
cggcagttgccgctgacggatgaacaaaagaaacgcatcccggatgaggccagcacctta
caccgactgttgggcgcgcagccgggcagtcagcgcttacgccatcacgcaggcaacccg
ttgcatctggatgtgctggtggtggatgaggcgtcgatgattgacctgccgatgatgtcg
cgactgatagatgcattgccgccgcacgggcgcgtcattttcctcggcgatcgcgatcag
cttgcctcggtcgaggcgggggcggtgctgggcgatatctgcgcctgggtgaacgcgggc
tataccccagaacgggcacagcagctgactcgtctgacgggaatgcccgttccggcaggc
aggggcaatgacgccgccatgctgcgggacagtctctgtctgctgcaaaaaagctaccgt
tttggcagtgattccggcattggacaactggctgcggcgatcaaccgtggcgataaggct
gcgataaaccgcgttttccagcagggctttagcgatatcgataaacggacgctggagagc
agtgaagattacaccgccatgcttgaagacgcgctgacaggttacggacactacctgcag
ttgcttcagacgcgcgcggagcctgcattaatcattcaggcattcaatgagttccaactg
ctgtgcgcgctgcgcgaaggaccgtttggtgtgagcggactgaatgaacgcatcgaactg
gctatgcagaaaaagcgtaaaattcatcgtctgccccattcccgctggtatgaagggcgg
cccgtaatgattgcccgcaacgacagcgcgctgggattgtttaacggcgatatcggtgtg
gcgctcgatcgtggacaaggattacgggtctggtttgcaatgccggatggcagcattaaa
tctgtgcagcccagtcgcttgccggaacatgaaaccacctgggcaatgacggtgcacaaa
tcgcagggctcggagttcgagcatgccgcgctggtattacccacacagcgtacgccggtg
gtgacacgggaactggtgtataccgctgtcacccgtgcccgtcgccgcctgtcgttatat
gccgatgaacgcattcttgccagtgcggttgccacccgaaccgaacgtcgcagcgggctg
tcgacgttgtttaaatga
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