Citrobacter amalonaticus Y19: F384_15335
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Entry
F384_15335 CDS
T03934
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
cama
Citrobacter amalonaticus Y19
Pathway
cama03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cama00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F384_15335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cama03019
]
F384_15335
Messenger RNA biogenesis [BR:
cama03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
F384_15335
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
AKE59834
UniProt:
A0A0F6TWD0
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Position
complement(3337650..3338180)
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AA seq
176 aa
AA seq
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MIDDDGYRPNVGIVICNRQGQVMWARRFGQHSWQFPQGGINPGESAEQAMYRELFEEVGL
SRKDVRILASTRNWLRYKLPKRLVRWDTKPVCIGQKQKWFLLQLMSGDAEVNMQTSSTPE
FDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFASVVMALQEAAPKPQSTPAYRRKRG
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
gtgattgatgacgatggctaccgcccaaatgtaggtatcgtaatttgtaatcgtcagggg
caggtgatgtgggcccggcggtttggtcagcactcctggcagttcccacagggtgggata
aacccaggagaatcagcagaacaggcgatgtaccgggaactgtttgaagaagtagggtta
agccgtaaagatgtgcgaatccttgcctctactcgcaactggttgcgttacaagttacca
aaacgtttggtgcgttgggatacaaagccggtgtgtatcggccagaaacaaaagtggttt
cttttgcagttgatgagcggggacgcggaagtcaatatgcaaaccagcagcactcctgag
tttgacggctggcgctgggtaagttactggtacccggttcggcaagtggtttcatttaaa
cgcgatgtctatcgcagggtgatgaaagagttcgcaagtgttgtgatggcgcttcaggaa
gcggcgccgaagccgcaaagtacacctgcttatcgacgtaaaagaggttaa
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