Citrobacter amalonaticus Y19: F384_17390
Help
Entry
F384_17390 CDS
T03934
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cama
Citrobacter amalonaticus Y19
Brite
KEGG Orthology (KO) [BR:
cama00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cama03016
]
F384_17390 (truB)
Enzymes [BR:
cama01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
F384_17390 (truB)
Transfer RNA biogenesis [BR:
cama03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
F384_17390 (truB)
Prokaryotic type
F384_17390 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AKE60199
UniProt:
A0A0F6TWT7
LinkDB
All DBs
Position
complement(3789254..3790198)
Genome browser
AA seq
314 aa
AA seq
DB search
MSRPRRRGRDIHGVLLLDKPQGMSSNDVLQKVKRLYNANRAGHTGALDPLATGMLPICLG
EATKFSQYLLDSDKRYRVIARLGQRTDTSDADGQIVQERPVTFTPEQLAAALDTFRGDIE
QVPSMYSALKYQGKKLYEYARQGIEVPREARPITVYELLFIRHEGDELELEVHCSKGTYI
RTIIDDLGEKLGCGAHVIFLRRLTVSKYPVDRMVTLERLREMVEQAEQQGIPAAELLDPL
LMPMDSPASDYPIVNLPLTSSVYFKNGNPVRTNGAPLEGLVRVTEGDDGKFIGMGEIDDE
GRVAPRRLVVEYPA
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtcctcgtcgtcgtggtcgcgacattcacggtgtcctgctgctggataagccg
cagggcatgtccagtaatgacgtactgcaaaaagtgaaacgcctctataacgccaaccgc
gccgggcataccggggcgctggatccgttagcgaccggcatgctgccgatttgcctcggg
gaagcgaccaagttttcgcagtatctgctggattccgacaagcgttatcgggtgattgcc
cgtctgggacagcgtacagacacctccgatgccgatgggcaaatcgtgcaggaacgtccg
gtcaccttcacccctgaacagttagctgccgcgctggacacgttccgcggcgatatcgaa
caggtgccgtcgatgtactcggcgctgaagtatcagggtaaaaagctgtacgaatacgcg
cgccagggcattgaagtgccgcgcgaagcccgaccgattaccgtttacgagttgctgttt
atccgtcatgaaggggatgaactggagctggaagtacactgctcaaaaggcacctatatt
cgcaccattattgacgatctgggtgaaaagctgggatgcggcgcgcacgtgatcttcctg
cgtcgtctgacggtcagcaaatatccggtggatcgtatggtcacgctggaacgtctgcgt
gaaatggtcgaacaggcggaacagcaggggataccggcagcagagttgcttgatccgctg
ctgatgccaatggatagtccggcttcggactatcccatcgttaatttgccgttaacctct
tcagtttacttcaaaaatggtaacccggtacgtacgaacggcgcaccgctggaagggctg
gttcgtgttacggaaggggatgacggtaagtttatcggcatgggtgagatcgacgacgaa
ggtcgcgtggctcctcgccggttagtggtggagtatccggcgtag
DBGET
integrated database retrieval system
