Citrobacter amalonaticus Y19: F384_17865
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Entry
F384_17865 CDS
T03934
Name
(GenBank) regulatory protein CsrD
KO
K18765
RNase E specificity factor CsrD
Organism
cama
Citrobacter amalonaticus Y19
Brite
KEGG Orthology (KO) [BR:
cama00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cama03019
]
F384_17865
Messenger RNA biogenesis [BR:
cama03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
F384_17865
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Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GAPES4
GGDEF
Motif
Other DBs
NCBI-ProteinID:
AKE60289
UniProt:
A0A0F6TWW5
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All DBs
Position
complement(3891537..3893477)
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AA seq
646 aa
AA seq
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MRLTTKFSAFVTLLTGLTIFVTLIGCSLSFYNAVQYKMTHRVQTVATAIDTHLVSRDFKQ
LRPQIDELMVSADVVRLDLLQGNKVIYSQTRTGSYRPVGTSNAFRELSVPLVKHPGMTMD
LVYQDPMGNYFHSLLTTAPLTLAIGFIVLMLFLSVRWLQRQLSGQELLEIRSTRILNGER
GASVRGTVYEWPARTSSALDMLLAEIQSAQEQRSRLDTLIRSYAAQDTKTGLSNRLFFDS
QLATLLDDQEKVGAHGVVMMIRLPDFNLLRDSWGRNLAEEELFSLINLLSTFMMRYPGSL
LARYHRSDFAVLLPHRTLKEAESVAGQLLKAVDALPTNKMLDRDDMVHIGICAWRSGQST
EQVMEHAEAATRNAVLQGGNSWAVYDDSLPEKGRGNVRWRTLIEQMLSRGGPRIYQKPAV
TRDGHVHHRELMCRIFDGNEEVSSAEYMPMVLQFGLSEEYDRLQISRVIPLLNYWPEENL
AMQVTVESLIRPRFQRWLRDTLMQCEKSQRRRIIIELAEADVGQHISRLQPVIRLVNALG
VRVVVTQAGLTLVSTSWIKELNVELIKLHPSLVRNIEKRTENQLLVQSLVEACSGTSTQV
YATGVRSRGEWQTLTARGVSGGQGDFFAASQPLDTNVKKYSQRYSV
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgcgattaacgacgaaattctcagcttttgtcacgctactcaccgggttaacaatcttt
gtaaccctgattggctgctcgctgagcttttacaacgccgtccagtacaagatgacccat
cgtgttcagacggtggcgactgcgattgatacgcatcttgtttcgcgcgatttcaagcag
ttaaggccacagatcgacgaactgatggtgtcagcggacgttgtgcgcctcgatctgttg
cagggcaataaagtcatttatagccaaacccgcaccggcagctatcgcccggttggcacc
agtaatgcctttcgcgagctctcggttccgctggtaaagcacccgggaatgacgatggat
ctggtttaccaggatccgatgggcaactattttcattcgctgctgaccactgcgccgctt
acgctggccattggttttattgtgctgatgttgtttctgtcggtacgttggcttcagcgt
caactttccggtcaggagctgttggagatacgttcgacgcgaattttgaacggagaacgc
ggagccagcgtgcgtggtacggtctatgaatggcctgcgcgcaccagcagcgcgctggat
atgctgctggccgaaatccagagcgctcaggaacagcggagccgactcgatacgctgatt
cgctcttacgccgcgcaggacaccaaaaccggcctcagcaatcgactcttttttgacagc
caactggcgacgctgctggacgatcaggaaaaagtcggcgcgcacggtgtggtgatgatg
atccgcctgccggactttaacctgttgcgcgacagttgggggcgtaacctggctgaagaa
gaactgttcagcctgatcaatttattgtccacctttatgatgcggtatccggggtcactg
ctggcgcgctaccatcgcagcgactttgccgttctcctgccacaccgtacgctgaaagag
gcggaaagcgtggccggacaactattaaaagcagttgatgcacttccgactaataaaatg
ctcgatcgtgacgatatggtacatatcggcatttgcgcctggcgtagcggacagtcgacc
gaacaggtgatggaacatgcggaagcggcgacccgcaacgccgtgttgcagggcgggaat
agctgggcggtgtatgacgattcgttgccggaaaaagggcgtggcaacgtgcgctggcgg
acgctgattgagcagatgctcagccgcggcggcccgcgaatctatcagaaaccggccgtc
acccgggacgggcacgtgcatcatcgggaactgatgtgtcgcatctttgatggtaatgaa
gaggtcagttcggcggaatacatgccgatggttttacagttcggtttatcagaagagtat
gaccgcttacaaataagtcgtgtcatcccgctgctgaactactggccagaagagaatctg
gcgatgcaggtgacggtagagtcgctgattcgtccgcgttttcagcgttggttacgcgat
accttgatgcagtgtgaaaaatcgcaacgaagacgcataattattgaacttgcagaggcg
gatgtaggtcaacacatcagccggttacaacccgtgatccgtttagtcaatgcattgggt
gttcgggttgttgtcacgcaggcaggtttaacgctggtgagtaccagttggattaaagaa
ctcaatgtggaattgatcaagctccatccgagtctggtcaggaacattgagaagcgaacg
gaaaaccagttgctggttcaaagtctggtggaagcgtgctcgggcaccagcacccaggtt
tatgcaacgggcgtacgttcgcgtggtgagtggcagacgctgacagcgcgtggtgtttcc
ggtggacagggggatttttttgctgcctcccagccgttggataccaatgtgaaaaaatat
tctcaaagatactcggtttaa
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