Citrobacter amalonaticus Y19: F384_19555
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Entry
F384_19555 CDS
T03934
Symbol
rfaD
Name
(GenBank) ADP-L-glycero-D-manno-heptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
cama
Citrobacter amalonaticus Y19
Pathway
cama00541
Biosynthesis of various nucleotide sugars
cama01100
Metabolic pathways
cama01250
Biosynthesis of nucleotide sugars
Module
cama_M00064
ADP-L-glycero-D-manno-heptose biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
cama00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
F384_19555 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
cama01005
]
F384_19555 (rfaD)
Enzymes [BR:
cama01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
F384_19555 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
cama01005
]
Core region
F384_19555 (rfaD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
KR
Motif
Other DBs
NCBI-ProteinID:
AKE60604
UniProt:
A0A0F6TXV5
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All DBs
Position
4244010..4244942
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AA seq
310 aa
AA seq
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MIIVTGGAGFIGSNIVKSLNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQI
MAGEEFGEIEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATY
GGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGS
MASVAFHLNTQLNNGETPKLFEGSENFKRDFVYVGDVADVNLWFWENGVSGIFNLGTGRA
ESFQAVADAALAYHKKSELEYIPFPEKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVT
EYMAWLNRDA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcgttaccggcggcgcgggctttatcggcagcaacatcgttaaatccctgaat
gataaaggcattaccgatattctggtggtggacaacctgaaagacggcaccaagtttgtt
aacctggtggatctgaacattgccgactacatggataaagaagatttcttaatccagatt
atggcgggcgaagagttcggcgagatcgaagcgattttccacgaaggagcctgctcttcc
actaccgagtgggacggcaagtacatgatggataacaactatcagtactccaaagagctg
cttcattactgcctggagcgcgaaattccgttcctgtatgcctcttccgcggccacctat
ggcggtcgtacttctgacttcatcgaatcccgcgaatatgagaaaccgctgaacgtctac
ggctactccaaattcctgtttgacgagtacgtgcgtcagatcctgccagaagccaattca
cagatcgtcggattccgttacttcaacgtctacggaccgcgtgaaggccataaaggcagc
atggcgagcgtggcgtttcatctcaacacgcaactcaataatggtgaaacgccgaagctg
tttgaaggcagcgaaaacttcaagcgcgacttcgtgtacgtcggcgatgtagcagacgtc
aacctgtggttctgggaaaacggcgtctccggtatctttaacctgggcactggccgtgca
gaatccttccaggctgtagccgatgccgcgctggcgtaccataagaaaagcgagcttgag
tacattccattcccggaaaaactaaaaggtcgctaccaggcatttactcaggccgatctg
accaacctgcgcgcggcgggctacgataagcccttcaagaccgttgccgaaggcgtaaca
gaatatatggcctggctgaaccgcgacgcgtaa
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