Citrobacter amalonaticus Y19: F384_19970
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Entry
F384_19970 CDS
T03934
Name
(GenBank) transcriptional regulator
KO
K17473
sigma-54 dependent transcriptional regulator, dga operon transcriptional activator
Organism
cama
Citrobacter amalonaticus Y19
Brite
KEGG Orthology (KO) [BR:
cama00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cama03000
]
F384_19970
Transcription factors [BR:
cama03000
]
Prokaryotic type
Helix-turn-helix
Other families
F384_19970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PRD
Sigma54_activ_2
AAA_5
AAA_22
AAA
EIIA-man
Mg_chelatase
AAA_16
NACHT
AAA_14
AAA_2
HTH_Crp_2
IstB_IS21
AAA_25
TrmB
AAA_24
nSTAND3
ATPase
Motif
Other DBs
NCBI-ProteinID:
AKE60675
UniProt:
A0A0F6RGY2
LinkDB
All DBs
Position
complement(4325445..4328243)
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AA seq
932 aa
AA seq
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MRRIEIVLGELERLTRGLDRADLAQETAFTAEAIGFNLGLARNSVSKDLNQLWNDGLAIK
SRGRPVFFLHRQTLETLLGRKLESSEREVRSVADLLPQAENTGGDDPFTGLIGYDRSLRD
AVEKGRAAVLYPQGLHVLLTGPSGVGKTFFAELMHRFACEQAAGSPPPLVYFNCAEYAHN
PELLSSHLFGHRQGAFTGASENKPGLVEQADGGYLLLDEVHRLPYEGQEKLFSILDKGEY
RPLGSSATARPISVRLICATTEPVSSSLLRTFQRRIQVSIDLPGIRQRSIEEQVELIVGF
LQRESRKIERTVSIDKTLLLWLLNKPLEGNIGQLKSDIQFLCAQAWASGMTEHNDTLQLD
KRLAEIPFHATPEQRLLVDALFEGKERLNIDARTLPALKTSLATGAEIEESDLFYSFLTR
EYVNLRNSNVPPAETLAILKNKLSSIFEYGLYSRDSVAHPPRYGDQIEERVTLLIGCVEQ
VLGFTLPENLVNPLRKHFLALIGYVQRGLIPQLYSSSLILDRCKDEYDNATLLCRKINEL
LHIQCPATEVVWLCLFLKECRHYRQRIDASPDCGVILVAHGATTATSMAQYVNRVLERDL
FSAVDMPFEQSVHDTLETLTQIIQTQRYQRLILMVDIGSLVHFGSTISKLFQIDVLLMPN
ITLTSLLEIGLDLSYETSDLPQLAALMQSKNIPCQLCTPQQENGGKVLVVSCITGMGTAE
KIKKVLEESFGELMSQDTRMVILDYNDVRSLERVQQALNANERLAGIVGTFQPGLPDIPF
ISLEELFSEQGPELVLSLLTPDLSSAERRLEMERSAMRFISALTMESIINHISVLNPQRI
LKEMEGVLNHLTTTLSLKPSRQVTLRFLIHCCCMVERIVINRKPLQMALENKPNLDPRAF
SVIKSAFLPIEEAYAIRLSDAEYFYIYELLYS
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgagacggatcgagatcgtactgggagagcttgaaaggctgacgcgtgggttggatcgt
gccgatttggcgcaggagacggcattcacggcggaggcgattggctttaacctggggctg
gcgcgcaactcggtcagtaaagatctcaatcagttgtggaacgatggtctggcgattaaa
agccggggacgtccggtgttctttctgcaccgacagacgctggagaccttgctggggcgc
aaactggagagtagcgagcgcgaagtgcgctcggtggccgacctgcttccgcaagcggaa
aatacgggcggtgacgatcctttcaccggcctgattggctacgatcgcagcctgcgtgac
gcagtagaaaaaggccgtgccgccgtcctctatccgcagggcctgcatgtattgctgacc
gggccgtctggcgtggggaaaaccttttttgccgaactgatgcatcgctttgcctgcgaa
caagccgccggttccccgccgccgctggtctattttaactgcgccgagtacgcccataac
ccggaactgctctcttcgcacctgtttggccatcgtcagggggcatttaccggcgcgagc
gagaataaacccggtctggtcgagcaggcggacggtggctatttgttgctcgacgaagta
catcgcctgccctacgaaggacaggagaaactgttttccattctcgataagggcgaatac
cgtccgcttggttccagcgccacggcgcgtccaatctcggttcgtctgatttgcgcgacc
acggaaccggtgagttcatcgctgttgcgcaccttccagcgacgaattcaggtgagcatc
gacctgccggggattcgtcagcgatcgattgaggaacaggtggagctgattgtcggcttt
ttgcagcgtgaaagtcgcaaaatcgagcgtacggtcagcatcgacaaaaccctgttgctc
tggctgttgaacaaaccgctggagggcaacattggtcagttgaagagcgatatccagttc
ctgtgcgcccaggcgtgggcgtcggggatgacggaacataacgacacgctacagctggat
aaacggctggcggagataccgttccatgccacgccggaacaacgactgctggttgacgcg
ttgtttgaaggaaaagaacggctgaacattgatgcgcgtacattgccggcgttgaaaacc
tcactggcgaccggggcggaaatcgaagagagcgatctcttttacagcttcctgacccgt
gaatatgtcaatctgcgcaacagcaacgtaccgccggcggaaacgctggctatcctgaaa
aacaagctcagttcaatcttcgaatatggcctttacagccgcgatagcgtggcccatccg
ccgcgctatggcgatcaaattgaagaacgcgtgacgctgctgatcggctgcgtggaacag
gtgctgggctttacgctgccggaaaatctggtgaatccgctgcgtaagcacttcctggcg
ctgattggctatgtccagcgaggcttaatcccgcagctctactcttccagcctgatcctc
gaccgctgcaaagatgaatacgataacgccacgctgttgtgccggaaaatcaatgaactg
ctgcatattcagtgcccggcgacggaagtggtctggctgtgtttgttcctgaaagagtgt
cgtcactaccgccagcgcattgatgccagcccggactgcggggtgatcctcgtcgctcac
ggcgcaaccaccgcgaccagcatggcgcagtacgtcaaccgcgtactggaacgcgatctg
ttcagcgcggtcgacatgccgtttgagcagtcggtgcatgacacgctggaaacgctgacc
cagattattcagacccaacgctatcagcggctgatcctgatggtcgacattggttcactg
gtgcatttcggcagtacgattagcaagttatttcagatagacgtgctgttaatgcccaac
atcacgctgaccagcctgctggaaatcggactggatttaagctacgaaaccagcgacttg
ccccagctcgcggcgctcatgcagagcaaaaacatcccctgtcagctctgtaccccgcag
caggaaaacggcggcaaagtgctggttgtctcctgcattaccggcatgggtacggcggaa
aagattaaaaaagtgcttgaggagagttttggcgagttaatgtcgcaggacacgcgaatg
gtgatcctcgattacaacgacgtgcgcagtcttgaacgtgttcagcaggcgctgaatgcc
aatgagcgactggcgggaattgtcggcacttttcagccggggctgccggatattccgttt
atctcgctggaagaactgttctctgagcaagggccggagctggtattaagcctgctgacg
ccggatctctccagcgctgaacgccgtctggagatggagcgcagcgccatgcggtttatc
agcgcgctgactatggagagcatcatcaaccatatttcggtgctcaatccgcagcgcatt
ctcaaagagatggagggcgtgcttaaccatctgacgaccacgctttccctgaaaccgagt
cgccaggtgacactacgcttcctgatccactgctgttgtatggttgagcgtatcgtgatc
aaccgtaaaccgttacagatggcgctggaaaacaaaccgaatctcgatccccgcgcgttt
agtgtcattaaatcggcgtttttgcccattgaagaggcctatgccatccgtttatcggat
gcggaatatttttatatctacgaactgctttatagctga
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