Citrobacter amalonaticus Y19: F384_20235
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Entry
F384_20235 CDS
T03934
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
cama
Citrobacter amalonaticus Y19
Brite
KEGG Orthology (KO) [BR:
cama00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cama03016
]
F384_20235 (trmE)
Transfer RNA biogenesis [BR:
cama03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
F384_20235 (trmE)
Prokaryotic type
Methyltransferases
F384_20235 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
RsgA_GTPase
Ras
AIG1
ABC_tran
Roc
AAA_28
Arf
SRPRB
Gtr1_RagA
AAA_18
Motif
Other DBs
NCBI-ProteinID:
AKE60727
UniProt:
A0A0F6TY90
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All DBs
Position
4383931..4385295
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AA seq
454 aa
AA seq
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MSHNDTIVAQATPPGRGGVGILRISGLKAREVAEAVLGKLPKPRYADYLPFKDADGTALD
QGIALWFPGPNSFTGEDVLELQGHGGPVILDLLLKRILTLPGLRIARPGEFSERAFLNDK
LDLAQAEAIADLIDASSEQAARSALNSLQGAFSARVNHLVEALTHLRIYVEAAIDFPDEE
IDFLSDGKIEAQLNGVIADLDAVRAEARQGSLLREGMKVVIAGRPNAGKSSLLNALAGRE
AAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLREASDEVERIGIERAWQEIEQADRVL
FMVDGTTTDAVDPADIWPDFIARLPSKLPITVVRNKADITGEPLGISEVSGHSLVRLSAR
TGEGVDVLRNHLKQSMGFDTNMEGGFLARRRHLQALAEAAEHLQQGKAQLLGAWAGELLA
EELRLAQQSLSEITGEFTSDDLLGRIFSSFCIGK
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgagccataacgacacgatcgtcgcccaggcaaccccaccgggacgcggtggtgtaggt
attctgcgtatctccggcctgaaggcacgtgaggtggctgaagccgttctgggcaagctg
cccaaacctcgttacgccgactatctgccgtttaaagatgccgacggtactgcgctggac
cagggaatcgctctgtggtttcccggccctaactcgtttaccggcgaggacgtactggag
ttacagggacacggcggcccggtcattctcgatttgctgttaaaacgtattctgacgctg
ccaggtctgcgtattgcccgtcccggcgagttctctgagcgcgcgtttctcaacgataag
ctcgacttagcccaggcggaggcgattgccgacctgattgacgccagctctgagcaggcg
gcacgctcggcgttgaactcgttgcagggggcgttttccgcccgcgtgaaccatctggtg
gaagcactcactcacctgcgcatctacgttgaagcggccatcgactttccggatgaagag
atcgacttcctgtccgatggaaaaatcgaagcgcagttgaatggcgtgattgccgacctc
gacgccgttcgtgctgaagcgcgtcaggggagcctgctgcgtgaagggatgaaggtggtc
attgccggacgcccaaacgccggaaaatcgagcctcctgaacgcgctggcgggccgtgaa
gccgccattgtcaccgacatcgccggtaccacgcgcgacgtgctgcgtgaacacatccat
atcgacggcatgccactgcacattatcgacaccgccggtctgcgcgaagccagtgacgag
gtggaacgtatcggtattgagcgtgcctggcaggaaattgagcaggcggatcgcgtgctg
tttatggtagatggtaccaccacggatgccgttgacccggctgatatctggccggacttc
atcgcccgcttaccgtcaaagctgccgattaccgtggtgcgtaacaaagcggatatcacc
ggcgagccgctgggtatcagcgaggtgagtggtcactcactggttcgcctttcggcacgc
accggtgaaggcgtggacgtactgcgcaaccatctcaaacagagcatgggtttcgatacc
aatatggaaggcggcttcctggcccgccgtcgtcacctgcaggcgctggccgaagccgct
gagcatctccagcagggcaaggctcaactgctgggcgcgtgggcgggtgaactactggct
gaagagctacgtctggcgcagcaaagcttaagcgagataaccggggagtttacctccgac
gatctgctgggacggattttctccagcttctgtattggtaagtaa
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