Citrobacter amalonaticus Y19: F384_20545
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Entry
F384_20545 CDS
T03934
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cama
Citrobacter amalonaticus Y19
Pathway
cama03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cama00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F384_20545 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cama03021
]
F384_20545 (rho)
03019 Messenger RNA biogenesis [BR:
cama03019
]
F384_20545 (rho)
Transcription machinery [BR:
cama03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
F384_20545 (rho)
Messenger RNA biogenesis [BR:
cama03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
F384_20545 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_22
AAA_25
S1CSD-TOTE-2
AAA
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
AKE60781
UniProt:
A0A0F6TXQ4
LinkDB
All DBs
Position
4454104..4455363
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKNTPVSELITLGENMGLENLARMRKQDIIFAILKQHAKSGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN
YDKPENARNKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP
KAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDY
NRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDDFFDMMKRS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaccgaattaaagaatacgccggtttctgagctgatcactctcggcgaaaat
atggggctggaaaacctggctcgtatgcgtaagcaggacattatttttgccatcctgaag
cagcacgcaaagagtggcgaagatatctttggtgacggtgtgctggagatattgcaggat
ggatttggtttcctccgttctgcagacagctcctatctcgccggtcctgatgacatctac
gtttcccccagccaaatccgccgtttcaacctccgcactggtgataccatctctggtaag
attcgcccgccaaaagaaggcgaacgctactttgcgctgctgaaagttaacgaagttaac
tatgacaaaccggaaaacgcccgtaacaaaattctcttcgaaaacttaaccccgctgcac
gcaaactctcgtctgcgtatggaacgtggtaacggttctaccgaagacttaacggcgcgt
gttctggatctggcttcgccaatcggtcgtggtcagcgtggtctgatcgtcgcaccgccg
aaagccggtaaaaccatgctgctgcaaaacattgcgcagagtattgcttacaaccaccca
gactgtgtgctgatggtcctgctgattgacgaacgtccggaagaagtgaccgagatgcag
cgtctggtgaaaggtgaagttgtcgcttctacctttgacgaaccggcatcccgtcacgtt
caggttgcggaaatggttatcgagaaagcgaaacgtctggttgaacataaaaaagacgtt
atcattctgctcgactccatcacccgtctggcgcgtgcttacaacaccgtggttccggcc
tccggtaaagtactgactggtggtgtggacgctaacgccctgcatcgtccgaagcgtttc
ttcggtgcggcacgtaacgtggaagagggcggcagcctgaccatcatcgccacggcgctg
attgataccggctctaagatggatgaagtcatctacgaagagtttaaaggcaccggtaac
atggaattgcacctctctcgtaagattgctgaaaaacgcgtcttcccggctatcgactac
aaccgttccggtacccgtaaagaagagctgctcaccacccaggaagagctgcagaaaatg
tggatcctgcgtaagattattcacccgatgggcgaaatcgacgcaatggaattcctcatt
aataaactggcaatgaccaagactaacgacgacttcttcgacatgatgaagcgctcgtaa
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