Citrobacter amalonaticus Y19: F384_20690
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Entry
F384_20690 CDS
T03934
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cama
Citrobacter amalonaticus Y19
Pathway
cama03420
Nucleotide excision repair
cama03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cama00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
F384_20690 (uvrD)
03430 Mismatch repair
F384_20690 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cama03400
]
F384_20690 (uvrD)
Enzymes [BR:
cama01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
F384_20690 (uvrD)
DNA repair and recombination proteins [BR:
cama03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
F384_20690 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
F384_20690 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
AAA_22
DMP19
Motif
Other DBs
NCBI-ProteinID:
AKE60806
UniProt:
A0A0F6TXR6
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All DBs
Position
4482134..4484296
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AA seq
720 aa
AA seq
DB search
MDVSYLLDSLNDKQREAVAAPRSNMLVLAGAGSGKTRVLVHRIAWLLTVENNSPYSIMAV
TFTNKAAAEMRHRIGQIMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL
RLLKRLIKAMNLDEKQWPARQAMWYINGQKDEGLRPHHIQSFGNPIEQTWQKVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT
GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAQTIRLEQNYRSTSNILSAANALIENN
NGRLGKKLWTDGVEGEPISLYCAFNELDEARFVVNRIKTWQDNGGALEQCAILYRSNAQS
RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD
RTLDVVRQASRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETVDMPLHVQ
TDRVIKDSGLRMMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL
EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATISRPVSHQRMG
TPMMENDTGYKLGQRVRHAKFGEGTIVNLEGSGEHSRLQVAFQGQGIKWLVAAYAKLETV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcttacctgctcgacagcctcaatgataaacagcgcgaagcggtggccgcg
ccacgtagcaacatgctggttctcgcgggggcggggagtggtaaaacacgcgtgctggta
caccgtatcgcctggctgttgacggtagaaaataactcgccgtactcgattatggcggtc
acctttaccaacaaagcggcggcggagatgcgtcaccgcatcggccagattatgggcacc
agccagggcggcatgtgggtgggcaccttccacggtctggcgcaccgactgctgcgcgcg
catcacatggatgcgaatttgccgcaggacttccagatcctcgacagcgaagaccagttg
cgcctgcttaagcgtctgatcaaggcgatgaatctcgacgagaagcagtggccggcgcgt
caggcgatgtggtacatcaacgggcagaaagacgaaggtctgcgcccgcatcatattcag
agcttcggtaacccgattgagcaaacctggcaaaaggtttatcaggcctatcaggaagcg
tgcgatcgtgcgggactggtggatttcgccgaactgctgctgcgcgcgcatgagttgtgg
ctcaacaagccgcatattcttcagcactatcgtgaacgtttcaccaatatcctggtggac
gagttccaggataccaacaacattcagtatgcctggattcgtctgctggctggcgatacc
ggcaaagtgatgattgtgggcgatgacgaccagtctatctacggctggcgcggcgcgcag
gttgagaacatccagcgcttcctgaacgatttccctggcgcacaaacgatccgccttgag
cagaactaccgctcaaccagcaatatcctcagcgcagcgaacgccctgatcgagaacaac
aacgggcgtctgggtaaaaaactgtggaccgatggcgtcgaaggcgaaccgatttcgctc
tactgcgcgtttaacgaactggatgaagcgcgctttgtcgtcaaccggatcaaaacctgg
caggataacggcggcgcgcttgagcagtgtgccattctctatcgcagtaacgcccagtcg
cgtgtgctcgaagaggcgttgttacaggccagcatgccgtaccgtatctacggcggcatg
cgcttcttcgaacgtcaggaaatcaaagacgcgctctcttatctgcgtttgattgcaaac
cgcaatgatgacgcggcctttgaacgcgtggtgaataccccaacgcgcgggattggcgat
cggacgctggacgtggtgcgccaggcttcgcgcgatcgccagctcacgctgtggcaggcg
tgtcgcgaactgttgcaggaaaaagcgctggccggtcgtgccgccagtgcgctgcaacgt
tttatggaactgatcgacgcgctggcccaggaaaccgtcgacatgccgctgcacgtgcag
actgaccgggtgattaaagactcgggcctgcgcatgatgtacgagcaggagaaaggcgag
aaaggccagacccgcatcgagaacttagaggaactggtgacggcgacgcgccagttcagt
tacaacgaagaagacgaagacctgatgccgttgcaggcatttctctcccatgcggcgctg
gaagcgggcgaagggcaggcggatacctggcaggatgcagtacagctcatgacgctgcac
tcagcgaaggggctggagttcccgcaggtgtttatcgtcgggatggaagaggggatgttc
cccagccagatgtcgctggatgagggcggacgccttgaagaagagcgccgtctggcctac
gtcggcgtgactcgtgcgatgcagaaactgaccttaacctatgccgaaacgcgccgactg
tatggcaaagaggtgtatcaccgtccgtcgcgcttcatcggcgagctgccggaagagtgt
gttgaagaggtgcgtttgcgtgcaacgatcagccgtccggtgagccatcagcgcatgggg
acgccgatgatggagaacgacaccggatacaagctgggccagcgtgtgcgtcatgctaag
ttcggagagggtaccattgtgaatctggaaggcagcggtgaacacagccggttgcaggta
gccttccaggggcagggaatcaaatggctcgtcgccgcgtatgcgaagttggaaacggtc
taa
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