Citrobacter amalonaticus Y19: F384_20830
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Entry
F384_20830 CDS
T03934
Symbol
fadB
Name
(GenBank) multifunctional fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
cama
Citrobacter amalonaticus Y19
Pathway
cama00071
Fatty acid degradation
cama00280
Valine, leucine and isoleucine degradation
cama00310
Lysine degradation
cama00362
Benzoate degradation
cama00380
Tryptophan metabolism
cama00410
beta-Alanine metabolism
cama00640
Propanoate metabolism
cama00650
Butanoate metabolism
cama00907
Pinene, camphor and geraniol degradation
cama00930
Caprolactam degradation
cama01100
Metabolic pathways
cama01110
Biosynthesis of secondary metabolites
cama01120
Microbial metabolism in diverse environments
cama01200
Carbon metabolism
cama01212
Fatty acid metabolism
Module
cama_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
cama00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
F384_20830 (fadB)
00650 Butanoate metabolism
F384_20830 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
F384_20830 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
F384_20830 (fadB)
00310 Lysine degradation
F384_20830 (fadB)
00380 Tryptophan metabolism
F384_20830 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
F384_20830 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
F384_20830 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
F384_20830 (fadB)
00930 Caprolactam degradation
F384_20830 (fadB)
Enzymes [BR:
cama01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
F384_20830 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
F384_20830 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
F384_20830 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
F384_20830 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
AKE60834
UniProt:
A0A0F6TY35
LinkDB
All DBs
Position
complement(4511521..4513710)
Genome browser
AA seq
729 aa
AA seq
DB search
MLYKGDNLYLDWLEDGIAELVFDAPGSVNKLDTATVASLGQALDVLEKQTDLKGLLLRSN
KAAFIVGADITEFLSLFLVPEEQLSQWLHFANSVFNRLEDLPVPTLSAVNGYALGGGCEC
VLATDYRLATPDLRIGLPETKLGIMPGFGGSVRMPRMLGADSALEIIAAGKDVGAEQALK
IGLVDGVVKAEKLIEGATAVLRQAINGDLDWKAKRQPKLEPLKLSKIEATMSFTIAKGMV
AQTAGKHYPAPMTAVKTIEAAARFGREEALNLENKSFVPLAHTNEARALVGIFLNDQYVK
GKAKTLTKNVETPKQAAVLGAGIMGGGIAYQSAWKGVPVVMKDINDKSLTLGMTEAAKLL
NKQLERGKIDGLKMAGVISTIHPTLDYAGFERVDVVVEAVVENPKVKKAVLAETEDKVRP
DTVLASNTSTIPISELASVLKRPENFCGMHFFNPVHRMPLVEIIRGEKSSDETIAKVVAW
ASKMGKTPIVVNDCPGFFVNRVLFPYFAGFSQLLRDGADFRKVDKVMEKQFGWPMGPAYL
LDVVGIDTAHHAQAVMSAGFPQRMQKDYRDAIDALFDASRFGQKNGLGFWRYKEDSKGKP
KKEEDATVDGLLADVSKAKRDFSDEEIIARMMIPMVNEVVRCLEEGIIASPAEADMALVY
GLGFPPFHGGAFRWLDTIGSAKYLDMAQQYQHLGPLYDVPEGLRNKARHNEPYYPPVEPA
RPVGDLKTA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgctttacaaaggcgacaacctgtacctcgactggctggaagatggcatcgccgaactg
gtgttcgatgccccaggctcagtgaacaaactcgacacggcaaccgtcgccagcctcggc
caggcgctggacgtactggaaaaacaaacagatttaaaagggctgctgctgcgttcgaac
aaagcggcctttatcgtcggtgcggatatcaccgaattcctgtcgctgtttctcgttccc
gaagaacagctcagccagtggttgcatttcgccaacagcgtctttaaccgtctggaagat
ctgccggtcccgaccctttctgctgttaacggctatgcgctgggcggcggttgcgaatgc
gtactggcgaccgattatcgtctggcgacgccggatctgcgtatcggtctgcctgaaaca
aagctgggcatcatgccaggctttggcggctccgtacgtatgccgcgcatgctaggcgcg
gacagcgcgctggaaatcattgcagccggtaaagacgttggggccgaacaggcgctgaaa
atcggcctggtcgatggcgttgtgaaagcagaaaagctgattgagggcgcaacagcggta
ttacgtcaggccatcaacggcgatctggactggaaagcgaagcgtcaaccgaagctggaa
ccgctgaagctcagcaagattgaagccaccatgagctttactattgctaaaggcatggtc
gcgcaaacggcaggcaaacactacccggctccgatgaccgcagtgaaaaccatcgaggcc
gccgcgcgctttggtcgtgaagaagcgctgaatctggaaaacaaaagttttgtcccgctg
gcgcacaccaatgaagcccgcgcgctggtcggtattttccttaacgatcagtatgtgaaa
ggcaaagcgaagacgctgaccaaaaacgttgagacgccaaagcaggctgctgtgctgggc
gcgggcattatgggcggcggcatcgcgtatcagtcggcatggaaaggcgtgccggttgtc
atgaaagatatcaacgacaaatccctgaccctcgggatgaccgaagccgcgaagctgctg
aacaaacagcttgagcggggcaaaattgacggtctgaagatggcaggcgtgatttcgacc
attcatcctacgctggactacgccggttttgagcgtgtcgacgtcgtcgtcgaagcggtg
gttgaaaatccaaaagtgaaaaaagccgtgctggcggaaaccgaagataaagttcgcccg
gacaccgtgctggcatcgaatacctccaccattcccatcagcgaactggcaagcgtcctg
aagcgtccggaaaatttctgcgggatgcacttctttaatccggttcaccggatgccgctg
gttgagatcattcgtggcgagaaaagctccgatgaaaccatcgcgaaagtggtcgcctgg
gccagcaaaatgggcaaaacgccgatcgtggtcaacgactgcccaggcttctttgttaac
cgtgtgctgttcccttacttcgctggattcagtcagttattgcgcgacggtgcggacttc
cgcaaagtcgacaaggtgatggaaaagcagttcggctggccgatgggcccggcctacctg
cttgatgtcgtgggcattgatactgcgcatcacgcgcaggccgtgatgtccgcaggcttc
ccgcagcgaatgcaaaaagattatcgcgacgcgattgatgcgctgtttgacgccagtcgt
tttggtcagaagaacgggctgggtttctggcgctataaagaagacagcaaaggtaagccg
aaaaaagaagaggatgccaccgttgacggcctgctggctgacgtcagtaaagcgaagcgg
gatttcagcgacgaagagattatcgcccgcatgatgatcccaatggtcaacgaagtggtg
cgctgtctcgaagaaggcattatcgccagcccggcagaggccgatatggcgctggtttat
ggtctgggtttccctccgttccacggcggcgcattccgctggctggatacgatcggcagc
gcgaaatatctcgatatggcgcaacagtatcagcacctcggtccgttatacgacgttccg
gaaggtctgcgtaataaagcgcgtcataacgaaccgtattatcccccggttgagcctgcc
cgtccggttggcgacctgaaaacggcttaa
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