Citrobacter amalonaticus Y19: F384_23930
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Entry
F384_23930 CDS
T03934
Name
(GenBank) mechanosensitive channel protein
KO
K22051
miniconductance mechanosensitive channel
Organism
cama
Citrobacter amalonaticus Y19
Brite
KEGG Orthology (KO) [BR:
cama00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cama02000
]
F384_23930
Transporters [BR:
cama02000
]
Other transporters
Pores ion channels [TC:
1
]
F384_23930
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MscS_TM
MscS_porin
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
Motif
Other DBs
NCBI-ProteinID:
AKE61404
UniProt:
A0A0F6TZ67
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All DBs
Position
complement(5127842..5131168)
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AA seq
1108 aa
AA seq
DB search
MRLIITFLMAWCLSLGAYAATAPDAKQITQELEQAKSAKPAQPDVVEALQSALNALEERK
GSLERVQQYQQVIDNFPKMSASLRAQLTNLRDEPRSVSPGMTTDALNQEILQVSSQLLEK
SRQAQQEQERAREIADSLSQLPQQQTDARRQLNEIERRIGTATGNTPLNQAQNFSMQAES
ARLKALVDELELAQLSANNRQELARMRAELAEKQSQQLDAYLQALRNQLNNQRQREAERA
LESTELLAENSADLPPDIVAQFKVNRELSAALNQQAQRMDLVASQQRQAASQTQQVRQAL
TTLREQSQWLGSSNLLGEALRAQVARLPEMPKPQQLDTEMAQLRVQRLRYEDQLNKQPQL
RQLHQADGQPLTAEQNRILEAQLRTQRELLNSLLQGGDTLILELTKLKVSNSQLEDALKE
VNEATHRYLFWTSDVRPMSFSWPIDIVQDLRRLISLDTVSQLGQASMMMLTSRETLLPLF
GALILVGFSIYSRRHFTRFLERSAARVGKVTQDHFWLTLRTVFWSILVASPLPVLWMTLG
YGLREAWPYPLAVAIGDGVTATVPLLWVVMICAAFARSNGLFIAHFGWPRERVLRAMRYY
LMSIGLIVPLIMALIMFDNLNDREFSGSLGRLCFILICGALALVTLSLKKAGIPLYLDKE
GSGDNIVNSMLWNLMIGAPVVAILAAAVGYLATSQALLARLETSVAIWFLLLVIYHVIRR
WMLIQRRRLAFDRAKHRRAEMLAQRARGEEESAHSTSLEGTIDVDESEVDLDAISAQSLR
LVRSILMLIALLSVIVLWSEIHSAFGFLENISLWDVTSTVQGVESLEPITLGAVLIAILV
FIITTQLVRNLPALLELALLQHLDLTPGTGYAITTITKYLLMLIGGLVGFSMIGIEWAKL
QWLVAALGVGLGFGLQEIFANFISGLIILFEKPIRIGDTVTIRDLTGSVTKINTRATTIS
DWDRKEIIVPNKAFITEQFINWSLSDSVTRVVLTIPAPSDVNSEEVTQILLTAAHRCSLV
IDNPAPEVFLVDLQQGIQIFELRIYAAEMGHRMPLRHEIHQLILAGFREHGIDMPFPPFQ
MRLESLNGRQTGKTLSSAGRRSRPAGSL
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcctgattataacgtttctgatggcctggtgcctcagcctgggggcgtacgctgca
accgcccccgacgccaaacaaatcacccaggaactggagcaggctaaatctgcaaagcct
gcccagcccgatgtcgtcgaagcccttcagtctgcattgaacgcgcttgaagaacgtaaa
ggttccctcgagcgcgttcagcaatatcagcaggttatcgataacttcccgaaaatgtcc
gccagcctgcgcgcgcagttaaccaacctgcgcgatgaaccccgcagtgtttcgccgggc
atgacgaccgatgcgctgaatcaggaaatccttcaggtcagcagtcagttgctggaaaaa
agccgtcaggcccagcaggagcaagagcgcgcccgtgagattgccgactcgctgagccaa
ctgcctcagcagcaaaccgatgcccgtcgacagcttaatgagattgaacgccgcatcggt
accgccaccggtaacacgccactcaaccaggcgcaaaatttcagcatgcaggctgaatcc
gcccgtctgaaagcgttggttgatgagctggagttggcgcagctttcggccaataatcgt
caggaactggcgcgtatgcgcgccgaactggcggaaaaacagagccagcaactggatgcg
tatttacaggcactgcgcaatcagctcaataaccagcgccagcgtgaagccgagcgggcg
ctggaaagcaccgagctactggcagagaacagcgctgatttaccgccggacattgttgcc
cagttcaaagtgaaccgggaactgtctgccgcgctgaatcagcaggcccagcgcatggat
ctcgtcgcctctcagcaacgtcaggccgccagtcagactcagcaggtacgtcaggcgtta
acgacactgcgcgaacagtcgcagtggttaggctcgtctaacctgttgggcgaagcatta
cgcgcccaggtggcgcgtctgccggaaatgcctaaaccccagcaactggataccgaaatg
gcgcaactgcgcgtccagcgtctgcgctatgaagaccagctcaacaagcagcctcagttg
cgccagctccatcaggcggacgggcaaccgctcactgcggaacaaaaccgtattcttgaa
gcgcaactgcgcacccaacgtgagctgctgaattcgctgttacagggcggcgacacgctg
atcctcgagctgactaaactgaaagtctccaatagccagcttgaagatgcgctaaaagag
gtgaatgaagcgactcaccgctatctgttctggacctctgacgtgcgcccgatgtctttc
tcgtggccgatagatatcgtgcaggatctgcgtcggctgatttcactcgacaccgtcagc
cagttaggccaggccagcatgatgatgctgaccagcagagaaaccctgctgccgctgttt
ggcgcgctgattctggtcggtttcagcatttactcgcgtcgccacttcacccgttttctg
gaacgttccgccgccagagtgggcaaggtgacgcaggatcacttctggctcaccctgcgt
accgtgttctggtcaatactggtggcctcgccgttgccggtactgtggatgacgctgggg
tacggactgcgcgaggcctggccgtatccgctggccgttgcgataggcgatggcgtcacg
gcgacagtgccactgctgtgggtcgtgatgatttgtgcagcgtttgcccggtcaaatggc
ctgtttatcgcccacttcggttggccgcgcgaacgcgtattgcgcgcaatgcgttattac
ctgatgagcatcgggcttatcgtgccgctgatcatggcgctcatcatgttcgataacctg
aacgatcgggagttctccggttcactcggtcgtctgtgctttattctgatttgcggtgcg
ctggcgctggtcactctgagcctgaaaaaagccggtattccgctctatctcgataaagag
ggtagcggcgataatatcgtgaacagcatgttgtggaacctgatgattggcgcaccggtg
gtcgcgatactggcggcggccgtaggttatctggcgacatcgcaggcgctgctggcgcga
ctggagacctccgtcgccatctggttcctgctgctggtgatttaccacgttattcgccgc
tggatgctcattcagcgccgcaggctggcctttgaccgcgccaagcaccgtcgcgcagaa
atgctggcccagcgcgcgcgtggcgaagaggaatcggcccattcaaccagcctggaagga
accattgacgttgacgagagcgaagtcgaccttgatgccatcagcgcccagtcgctccgt
ctggtacgctccatcctgatgctgatcgccctgctgtcggtcattgtgctgtggtcggaa
attcattccgcattcggcttcctcgaaaacatctcactgtgggacgtcacctccacggta
cagggagtcgaaagcctggaaccgattacgctgggtgcggtgctgatcgcgattctggtg
ttcatcatcaccacccaactggtgcgtaatctacctgcgcttctcgaactggcgttgctg
caacacctcgatctcacgccgggtaccggctacgccatcacgaccatcaccaagtacctg
ctgatgctgattggcggtctggtgggcttctcgatgattgggattgagtgggcaaaactg
caatggctggtggcggcactcggtgttggtctgggctttggcttgcaggaaatcttcgcc
aactttatctccggcctgatcatcctgtttgaaaaaccgattcgtattggcgatacggtg
accattcgcgatctgaccggcagcgtaacgaagatcaatacccgcgcaaccaccatcagc
gactgggaccgcaaagagatcatcgtgccgaacaaagcgtttatcaccgagcagttcatc
aactggtcgctgtccgattccgtaacacgtgtggtgctgacgattccggcgccgtccgat
gtaaacagcgaagaggtgacgcagatcctgctgaccgccgcacaccgctgctcactggtg
atcgacaacccggcaccggaagtcttcctggtcgatctccagcaagggatccagatcttc
gaactacgtatctatgccgccgagatgggccaccgtatgccgctgcgtcatgaaatccac
cagttgattctggcgggcttccgcgagcacggtatcgatatgccgttcccaccgttccag
atgcgtctggagagtttgaatggcagacaaacggggaaaacgctcagttctgccggcaga
agaagtcgtccggcggggagtttgtaa
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