Citrobacter amalonaticus Y19: F384_24190
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Entry
F384_24190 CDS
T03934
Symbol
cpdB
Name
(GenBank) 2', 3'-cyclic nucleotide 2'-phosphodiesterase
KO
K01119
2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:
3.1.4.16
3.1.3.6
]
Organism
cama
Citrobacter amalonaticus Y19
Pathway
cama00230
Purine metabolism
cama00240
Pyrimidine metabolism
cama01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cama00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
F384_24190 (cpdB)
00240 Pyrimidine metabolism
F384_24190 (cpdB)
Enzymes [BR:
cama01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.6 3'-nucleotidase
F384_24190 (cpdB)
3.1.4 Phosphoric-diester hydrolases
3.1.4.16 2',3'-cyclic-nucleotide 2'-phosphodiesterase
F384_24190 (cpdB)
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Gene cluster
GFIT
Motif
Pfam:
5_nucleotid_C
Metallophos
PGA_cap
Motif
Other DBs
NCBI-ProteinID:
AKE61450
UniProt:
A0A0F6RHU7
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All DBs
Position
complement(5176920..5178863)
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AA seq
647 aa
AA seq
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MIKFSATLLATLIAASVNAATVDLRIMETTDLHSNMMDFDYYKDTATEKFGLVRTASLIN
AARSEAKNSVLVDNGDLIQGSPLGDYMAAKGLKEGDIHPVYKALNTLDYAVGNLGNHEFN
YGLEYLQKALAGAKFPYVNANIIDVKTQKPLFTPYLIKETDVVDQEGHKQTLKIGYIGFV
PPQIMTWDKANLSGKVTVNDITATARQYVPEMREKGADVVVVIAHSGLSADPYQSMAENS
VYYLSDVPGVDAIMFGHAHAVFPGKDFASIKGADIAKGTLNGVPAVMPGMWGDHLGVVDL
VLNNDSGKWQVTQAKAEARPIYDAAAKKSLAAEDSKLVDILKADHDATREFVSKPIGKSA
DNMYSYLALVQDDPTVQVVNNAQKAYVEHFIQGDPDLAKLPVLSAAAPFKVGGRKNDPAS
FVEVEKGQLTFRNAADLYLYPNTLVVVKASGKEVKEWLECSAGQFNQIDSTSSKPQSLIN
WDGFRTYNFDVIDGVEYQIDVSQPARYDGECQTVNPTAERIKNLTFNGKPIDPNATFLVA
TNNYRAYGGKFAGTGDSHIAFASPDENRSVLAAWIGAESKRVGEIHPAADNNWRLAPIHS
ETKLDIRFETSPSDKAAAFIKEKGQYPLQHVATDDIGFAIYQMDLSK
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgattaagtttagtgcaacgctgctggccacgctgatcgcggccagcgtgaatgccgcg
accgtcgatctgcggataatggaaaccactgatttacatagcaacatgatggatttcgat
tattacaaagataccgcaaccgaaaaattcggactggtacgtaccgcaagtttgattaac
gccgcgcgcagtgaagctaaaaatagcgtgctggtcgacaatggcgatctgattcagggc
agtccactgggcgactatatggcggccaaagggttgaaagagggggatatccatccggtc
tacaaggcgctgaatacgctggattacgcggtgggtaacctcgggaatcatgaatttaac
tacggcctggagtatctgcaaaaggcgctggctggtgcgaagttcccctacgttaacgcc
aatatcatcgacgttaagacccaaaagccgttatttaccccctacctcattaaagaaact
gacgtcgtcgatcaggaaggccacaagcagacgctgaaaataggctatatcgggtttgtc
cctccgcagatcatgacctgggataaagcgaacctgagcggtaaagtgacggttaacgac
attaccgccaccgcgcgccagtatgtcccggaaatgcgcgaaaaaggggccgatgtggtg
gtggtgattgcgcattcaggactctctgctgatccgtaccagagcatggcggagaactcc
gtttattatctcagcgacgtgcccggcgtggacgccatcatgtttggtcatgcccacgcg
gtcttccccggtaaagactttgccagcatcaaaggcgctgatatcgcgaaagggacgctg
aacggcgtaccggcggtgatgccaggcatgtggggcgatcatctcggcgtggtagatctg
gtgctcaataacgacagcggtaaatggcaggtgacacaggcgaaagccgaagcgcgcccc
atttacgacgccgccgcgaagaaatcgctcgctgccgaagacagcaaactggtggatatt
ctgaaagccgaccacgatgcgacccgtgaattcgtcagtaagcctatcggtaaatccgct
gataacatgtacagctatctggcgctggtgcaggacgatccgaccgttcaggtggtcaac
aatgcgcagaaagcctatgtcgaacatttcattcagggcgacccggacctggcgaaactg
ccggtgctttccgccgctgcgccgtttaaagtcggcgggcgcaagaacgatccggccagt
tttgtcgaggtcgaaaaaggccagttgaccttccgtaatgccgctgacctctatctgtac
ccgaacacgctggtggttgttaaagccagtggcaaagaggtgaaagagtggcttgagtgc
tcagccggacagtttaatcaaatagacagcaccagcagcaagccgcagtcgctcattaac
tgggatggttttcgcacctataacttcgatgtgatcgatggtgtggaataccagattgat
gtctcgcagcccgcacgttatgacggcgaatgccagacggtcaatccaacagcggaaagg
attaaaaatctgaccttcaacggcaagccgattgatcccaatgccaccttcctggtcgcc
accaataactatcgcgcctatggcggtaagtttgccggaaccggtgacagccatattgcc
tttgcgtcaccggatgagaaccgctcggtgctggcggcatggattggcgcggaatctaaa
cgtgtcggggaaattcatccggccgccgataacaactggcgtctggcgccgattcacagc
gagacgaaactggatatccgcttcgaaacgtcaccgagtgataaagccgccgcgtttatc
aaagagaaaggccaataccccctgcaacacgtcgccaccgatgatatcggtttcgcgatt
tatcagatggatttaagcaagtaa
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