Citrobacter amalonaticus Y19: F384_24895
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Entry
F384_24895 CDS
T03934
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
cama
Citrobacter amalonaticus Y19
Pathway
cama03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cama00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
F384_24895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cama03400
]
F384_24895
Enzymes [BR:
cama01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
F384_24895
DNA repair and recombination proteins [BR:
cama03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
F384_24895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AKE61576
UniProt:
A0A0F6TZD2
LinkDB
All DBs
Position
5334966..5335472
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AA seq
168 aa
AA seq
DB search
MVKDILAPGLRVVFCGINPGLSSAGTGFPFAHPANRFWKVIHQAGFTDRQLKPEEAEHLL
DFRCGVTKLVDRPTVQANEVSRQELHEGGRSLIAKIEQYQPHALAILGKQAFEQGFSQRG
VQWGKQSITIGATQVWVLPNTSGLSRITLDKLVDAFRELDEALIVRGR
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atggttaaggacattttagcgccggggttgcgggtcgtgttctgtggcatcaatcctggg
ctttcttctgccgggacggggtttccgtttgcacatccagcgaaccgtttctggaaggtg
attcatcaggccggttttaccgaccgccagctcaaacccgaagaggctgaacacctgctg
gattttcgctgcggcgtcaccaaactggtcgacagacctacggtgcaggccaatgaagtc
tcgcgtcaggagttgcacgagggcggacgtagtctgattgctaaaattgagcaataccaa
ccgcatgctctggcgattctgggtaagcaggcatttgagcagggtttcagccaacgcggc
gtgcagtggggaaaacagagcataacgattggcgcaacgcaggtgtgggtgttgccgaat
accagcgggttgagccgcattacgctggataaactggtggacgcattcagggaactggat
gaggcactgatcgtgcgggggagatga
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