Carcharhinus amblyrhynchos (grey reef shark): 145341081
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Entry
145341081 CDS
T12063
Symbol
rfc4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
camb Carcharhinus amblyrhynchos (grey reef shark)
Pathway
camb03030
DNA replication
camb03410
Base excision repair
camb03420
Nucleotide excision repair
camb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
camb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
145341081 (rfc4)
03410 Base excision repair
145341081 (rfc4)
03420 Nucleotide excision repair
145341081 (rfc4)
03430 Mismatch repair
145341081 (rfc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
camb03032
]
145341081 (rfc4)
03036 Chromosome and associated proteins [BR:
camb03036
]
145341081 (rfc4)
03400 DNA repair and recombination proteins [BR:
camb03400
]
145341081 (rfc4)
DNA replication proteins [BR:
camb03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
145341081 (rfc4)
DNA Replication Termination Factors
ELG1-RFC complex
145341081 (rfc4)
Chromosome and associated proteins [BR:
camb03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
145341081 (rfc4)
DNA repair and recombination proteins [BR:
camb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
145341081 (rfc4)
Check point factors
HRAD17(Rad24)-RFC complex
145341081 (rfc4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_assoc_2
AAA_lid_RFC1
AAA_22
AAA_16
AAA_11
Mg_chelatase
AAA_30
SLFN-g3_helicase
AAA_14
AAA_24
DUF815
AAA_19
ResIII
AAA_28
RuvB_N
AAA_23
VipD-like_C
AAA_5
AAA_7
Motif
Other DBs
NCBI-GeneID:
145341081
NCBI-ProteinID:
XP_080042029
LinkDB
All DBs
Position
3:complement(121329358..121350922)
Genome browser
AA seq
360 aa
AA seq
DB search
MQAFLKGAGVIGAKPVKEKAAAGTSGEQKKQKAVPWVEKYRPKCVSEVAFQEEVVAVLKK
SLEGADLPNLLFYGPPGTGKTSTILAAARELFGPDLYRKRILELNASDERGIQVIREKVK
NFAQLTVAGTRSDGKTAPPFKIIILDEADSMTNAAQAALRRTMEKESKTTRFCLICNYIS
RIIEPLTSRCSKFRFKPLTDSIQEKRLLDICEKESVQCSSETISILINVSEGDLRKAITY
LQCATRLTGGKDITEQIISEIAGVVPSEIIDSLLAACHSSSFEKLETVVKNMINEGYAAT
QLINQLHDVIVDQEDLNDQQKSAITLKLAEVDKCLADGADEYLQLISLSAVMMQQFTHTV
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcatttttaaaaggtgctggagttattggtgccaaaccagtaaaggaaaaggcc
gcagcaggaaccagtggcgagcagaagaaacagaaagcagttccctgggtggagaaatat
cgcccaaaatgtgtgtctgaagtggcttttcaagaggaagttgtggctgtgctaaagaag
tcacttgaaggagctgatcttcccaacttgctgttttatggacctcctggcacaggaaaa
acttccacaatattggctgcagcaagagaactctttgggcctgacttgtatcgcaagaga
attcttgagctgaatgcctctgatgagcgtggtattcaggttatacgagaaaaggtgaaa
aatttcgcacagttgactgtagctggaactcgctcagatggaaaaactgctccacctttt
aaaattatcatcttagacgaagcagactctatgacaaacgctgcacaggctgctcttcgt
cgaacaatggaaaaagagtcaaaaaccacacgtttctgccttatctgcaactacatcagc
agaataattgaaccactgacgtctcgatgttcaaagttccgttttaaacctttgacagac
agtatacaagagaaaaggttgctggatatctgtgagaaggagagtgtgcagtgcagcagt
gaaacgatctctattctcatcaatgtatctgaaggagacctgagaaaggcgataacttac
ctgcagtgtgcaacaagacttacgggagggaaagacatcacagaacaaatcatcagtgaa
attgctggggttgtgccatcagaaatcattgacagccttttagctgcatgccacagcagt
tcttttgaaaaactggaaactgtcgtcaaaaatatgattaatgaaggttatgctgcaaca
cagttaatcaaccagctacatgatgtcattgtcgaccaagaagatcttaacgatcaacag
aaatcagcgatcacgctaaagctagcagaagttgataagtgcttagctgatggtgctgat
gagtacctgcaactgatcagcctttctgctgttatgatgcaacagtttacacacactgtt
tga
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