Carcharhinus amblyrhynchos (grey reef shark): 145347574
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Entry
145347574 CDS
T12063
Symbol
fubp1
Name
(RefSeq) far upstream element-binding protein 1 isoform X1
KO
K13210
far upstream element-binding protein
Organism
camb
Carcharhinus amblyrhynchos (grey reef shark)
Brite
KEGG Orthology (KO) [BR:
camb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
camb03019
]
145347574 (fubp1)
03041 Spliceosome [BR:
camb03041
]
145347574 (fubp1)
Messenger RNA biogenesis [BR:
camb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
145347574 (fubp1)
Spliceosome [BR:
camb03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
145347574 (fubp1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
FUBP_C
KH_KHD4_2nd
KH_PARP10_1st
CG7065_mid
Motif
Other DBs
NCBI-GeneID:
145347574
NCBI-ProteinID:
XP_080051267
LinkDB
All DBs
Position
9:10226489..10268523
Genome browser
AA seq
703 aa
AA seq
DB search
MAEYSAVAPPNALASGGGGGGGAGGGAGGGGAGAGSGGGGAPGGGGGGGFKNDAFADALQ
RARQIAAKIGGDTGTPINTSDYGYGGQKRPLEDGDQPDTKKVAQNDPFGAQLAAMHQQRS
IATEEYKVPDGMVGFIIGRGGEQISRIQQESGCKVQIAPDSGGLPERSCMLTGSPDSILA
AKRLLDQIVERGRIGPGTHHGDGPGTSVQEIMIPASKAGLVIGKGGETIKQLQERAGVKM
VMIQDGPQPTGSDKPLRITGDPFKVQQAKDMVMDLIRDRDQGGFREQRNEYGSRLGGTNE
ALDVPVPRFAVGIVIGRSGEMIKKIQNDAGVRIQFKPDDGTTPERIAQILGPPDRCQHAA
EILTDLLRSVEAGMPPGPGGPGPGRGRGRGQGNWNMGPPGGLQEFTFTVPSSKTGIIIGK
GGETVKAISQQSGARIELQRNPPPNADPNFKMFIIRGSTQQIDYARQLIEEKIGAPTGPP
GPPGPHGPHGPHLPPGPHGPPGPPGPGTPMGPYNPGPYNPGPPGPPQHGPPAPYAPQGWG
NAYQPWQQQGQPDPNKAGDANTAAWAAYYAQYYQQQAQQPPAASSTGQGNTPNSAQAGDP
NQPNAAQAPQTDYTKAWEEYYKKLGQQGQPQGAQQDYTKAWEEYYKKQSQAAQASSTAAQ
PGGQPDYSAAWAEYYRQQAAYYSQTNSQGIPQHPPAQQPPQAQ
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggccgagtactcagcggtggcgccgcccaacgccttagccagcggcggcggaggagga
ggcggagcgggcggcggagcggggggaggcggtgcgggcgctggaagtggcggcggcggt
gcccccggcggcggtggtggcggcggcttcaagaacgacgcgttcgccgacgcccttcag
cgggcccggcagattgcagcaaaaattggaggggatacaggaacaccaataaatacgtct
gactatggatacggtggacaaaaaaggcctctggaagatggagatcagccagataccaaa
aaggtcgcacagaatgacccatttggagcacagctagctgcaatgcatcaacagaggtca
atagccacagaggaatacaaagtacctgacggcatggttggatttataattggtcgaggt
ggggaacagatctcgcgcatacagcaagagtctggatgtaaagttcagattgcgcctgac
agtggtggtttaccagaaagatcctgcatgttgacaggaagtcctgattctattctagct
gcaaagaggctacttgatcaaatagttgaaagaggccgaattggtccaggtacgcatcat
ggagatggaccaggtacttcagtgcaggagatcatgattcctgcaagcaaggctggactt
gttattgggaaaggtggagaaacaatcaagcagttgcaagaacgtgcaggagtcaagatg
gtgatgattcaagatggacctcagccaacaggatcagacaaacccctccgcataacagga
gatccattcaaagtacagcaagccaaggacatggtgatggatctaattcgtgaccgagac
caaggtggttttagggagcagcgcaatgaatatggatcccgtttgggaggaaccaatgaa
gcattggatgtccctgtacctcgatttgctgttggtattgtaatagggagaagtggagaa
atgatcaagaagatacagaatgatgctggtgtgaggattcagttcaagccagatgatggg
acgacgccagaaagaatagctcagatcctgggccctccagacagatgtcagcatgctgca
gaaatacttacagacctcctacgaagtgtggaggctggcatgcctccaggtcctggtggc
cctggacctggcagaggaagagggagaggccaagggaactggaatatgggccctccaggt
ggacttcaagagttcactttcacagtacccagcagcaagactggcatcatcattggcaaa
ggtggtgagaccgtaaaggcaattagccaacagtcgggagcacggatagagcttcagaga
aacccacctccgaatgctgatcccaactttaaaatgtttattattcgtggatcgactcag
cagattgattacgcgagacaacttattgaagaaaaaattggggctcctactggtcctcct
gggccacctggcccccatggtcctcatggaccccacttgcctcctggccctcatgggccc
cctggtcctccaggccctggaactccaatgggaccctataatccggggccctataatcca
ggaccacctggtcctcctcagcatggtccaccagcaccgtatgctccacaaggatggggg
aatgcctatcagccctggcagcaacagggccaaccagatccaaataaagctggagatgca
aatacagctgcatgggcagcatattacgctcagtattatcagcaacaagcacagcagcca
cctgcagcttcaagcactggtcagggcaataccccaaattctgcacaggcaggtgaccca
aaccagcccaatgcggcccaggctcctcagaccgattataccaaagcctgggaagaatat
tacaagaaattaggtcaacagggacaaccacaaggagcccaacaggattacaccaaagct
tgggaagaatactacaagaaacaaagtcaggcagctcaagcttccagtacggcagctcag
cccggtgggcagccagactacagtgcggcgtgggctgagtattacaggcagcaagcggct
tactacagtcagacaaactcccagggaattccccagcacccgccagcacagcaaccccca
caggcccagtaa
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