Carcharhinus amblyrhynchos (grey reef shark): 145352770
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Entry
145352770 CDS
T12063
Symbol
LOC145352770
Name
(RefSeq) serine/arginine-rich splicing factor 5-like
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
camb Carcharhinus amblyrhynchos (grey reef shark)
Pathway
camb03040
Spliceosome
camb05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
camb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
145352770 (LOC145352770)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
145352770 (LOC145352770)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
camb03041
]
145352770 (LOC145352770)
Spliceosome [BR:
camb03041
]
Common components
Common spliceosomal components
SR proteins
145352770 (LOC145352770)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
145352770
NCBI-ProteinID:
XP_080059195
LinkDB
All DBs
Position
14:complement(71724731..71735673)
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AA seq
272 aa
AA seq
DB search
MSSRVFIGRLSPHARERDVEKFFKGYGRIKEIDLKNGFGFVEFEDHRDADDAVYELDGKE
LCSERVTVEHARARPRGGRGGGRYQGRFSPRRPRSEGRNGPPVRTENRLIVENLSSRVSW
QDLKDFMRQAGEVTFADAHRHKMNEGVVEFASYSDLKNAVDKLSGTEINGRKIRLIEEPK
HHRSRSRSRSRSRTFSRSRSRSRSRSRKSYSRSKSRSRSKSRSRSRSRVPAREQKARSPS
PSKSPASLERPRSRSRSRSRSMSRSPSVASAD
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgagctcccgtgtgttcattggtcgattaagccctcatgctagagaaagggatgtggag
aaattctttaaaggatatgggcgaataaaggaaattgacttgaagaatggatttggattt
gtggaatttgaagaccacagggatgcagacgatgctgtttatgaattggatgggaaggaa
ttgtgcagcgagagagttacagttgaacacgccagagcacggcctagagggggtcgtgga
ggaggacgctatcaaggtcgctttagcccacgccgtccacggagtgagggaaggaatgga
cctccagttcgtacagagaaccggctgattgttgagaatttgtcttcacgagttagttgg
caggatctgaaagacttcatgagacaggctggggaagttacctttgcagatgcgcacagg
cacaaaatgaatgaaggggttgttgagtttgcctcgtatagtgatttgaagaatgctgtt
gataaactctctggcacagaaatcaatggaagaaagatcagactgattgaggaacctaaa
catcatcggtctcgcagcagatcgcgttcacgtagccgtacgttttccagatctcggagt
cgatctcgctccagaagccgcaaatcctacagtaggtcaaagagtaggagccgcagtaaa
tcccgctctcgcagtagatctcgtgtccctgccagggaacaaaaggcccgttcgccctcg
ccgtccaaatctcctgcatcattggagcggccaagatctcgttctcgctcacgctctcgg
tcaatgtcaaggtcaccttctgttgcaagtgctgattaa
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