Carcharhinus amblyrhynchos (grey reef shark): 145354428
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Entry
145354428 CDS
T12063
Symbol
tial1
Name
(RefSeq) nucleolysin TIAR isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
camb
Carcharhinus amblyrhynchos (grey reef shark)
Brite
KEGG Orthology (KO) [BR:
camb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
camb03019
]
145354428 (tial1)
03041 Spliceosome [BR:
camb03041
]
145354428 (tial1)
Messenger RNA biogenesis [BR:
camb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
145354428 (tial1)
Spliceosome [BR:
camb03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
145354428 (tial1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Nup35_RRM_2
RRM_Nup35
RBD_AKAP-17A
Calcipressin
Tmrp11_N
Motif
Other DBs
NCBI-GeneID:
145354428
NCBI-ProteinID:
XP_080061873
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All DBs
Position
17:32917767..32956235
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AA seq
390 aa
AA seq
DB search
MEDDSYPRTLYVGNLSRDVTEALILQLFSQIGPCKSCKMITEQTASRRVNSSVGFSVLQH
SSNDPYCFVEFYEHRDAAAALAAMNGRKIMGKEVKVNWATTPSSQKKDTTNHFHVFVGDL
SPEITTEDLKSAFAPFGRISDARVVKDLATGKSKGYGFVSFYSKLDAENAIVHMGGQWLG
GRQIRTNWATRKPPAPKSAPESSSKHLKFEEVVNQSSSTNCTVYCGGIASGLTEQLMRQT
FSPFGQIMEIRVFPEKGYSFVRFATHDSAAHAIVSVNGTTIEGHIVKCYWGKETTDSANK
YQQMEFAQPWGQWGQWYGNAQQYGQYVANGWQVPSYGMYGQAWNQQGFGVDQPQSAAAWV
GGFSAQPAQGQGTAVIPNQAGFGMAGYQTQ
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgactcgtacccgcgcaccctctacgtaggtaatctctctagagatgtgact
gaagcccttatacttcaactttttagtcagattggtccatgcaaaagttgtaaaatgatt
actgagcaaaccgcaagcagaagggtgaactcttctgttggattttctgttttgcagcat
tcaagcaatgatccgtattgctttgtggaattctacgagcatagggatgcagcagctgca
ttggctgcaatgaatggccgtaaaataatgggtaaggaagtcaaagtgaactgggcaaca
acaccaagtagccagaagaaagatacaaccaatcattttcacgtgtttgttggtgactta
agccctgagataaccacggaggatctcaaatctgcttttgcaccctttggtagaatatcg
gacgctcgtgttgtaaaagacttggcaacagggaaatctaaaggctatggatttgtatct
ttttatagtaaactggatgcagaaaatgcaattgtgcacatgggtggtcaatggctggga
ggccggcaaattcgaacaaactgggcaacacgcaaaccgccagctccaaagagtgcacca
gagagtagttcaaaacatctaaaatttgaagaagtagtgaatcagtccagttccacaaat
tgtactgtctactgtggaggtattgcttcaggcctaacagaacagcttatgcgtcagact
ttctcaccatttgggcaaatcatggaaattcgtgttttcccagaaaagggatactccttc
gttaggtttgcaacccatgatagtgctgctcatgcaatagtgtcagttaatggaaccact
attgaaggtcatattgttaaatgctattggggtaaagaaactactgattcggctaacaag
tatcagcagatggaatttgctcagccctggggtcagtggggccagtggtatggcaacgct
caacagtatggtcagtatgtagccaatggttggcaagtgccctcttacggcatgtatggc
caagcgtggaatcagcaaggatttggagtagatcaacctcaatctgcagctgcctgggtt
ggtggatttagtgctcagccagcccaagggcagggtactgctgttatacctaaccaagct
ggctttgggatggcaggttaccagacgcaatga
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