Carcharhinus amblyrhynchos (grey reef shark): 145363122
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Entry
145363122 CDS
T12063
Symbol
rpn1
Name
(RefSeq) dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1
KO
K12666
dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 1 (ribophorin I)
Organism
camb Carcharhinus amblyrhynchos (grey reef shark)
Pathway
camb00510
N-Glycan biosynthesis
camb00513
Various types of N-glycan biosynthesis
camb01100
Metabolic pathways
camb04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
camb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
145363122 (rpn1)
00513 Various types of N-glycan biosynthesis
145363122 (rpn1)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
145363122 (rpn1)
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Motif
Pfam:
Ribophorin_I
DNA_repr_REX1B
Motif
Other DBs
NCBI-GeneID:
145363122
NCBI-ProteinID:
XP_080074760
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Position
3:complement(3500330..3529073)
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AA seq
599 aa
AA seq
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MDGLLSHIILFVGLWASLRPVYGDSLVNEDVKRSIDLGTHLAKITADLTLSNSGPSPASS
FILAVEPGLEKHLAYFGVTLKSDDEEEISLALEETRVTGQSGKFFKVKLGTQLAAGAKVR
LALESIYTHVLRPFPTHIAQAEKQFVVFEGNHYFYSPYLTKTQTTRVKLASKNVESYTKL
GNPSKSEDTVDYGPFKDIEAFSQDTMRLHYENNSPFLAIVSMTRLIEVSHWGNIAVEETI
DLKHCGAVLKGPFSRYDYQRQPDSGISSVKSFKTILPAAAQDVYYRDDIGNISTSHLVVL
DDSVEMEVRPRFPLFGGWKTHYVIGYNLPSYEYLYNLGDQYALKMRFVDHVFDDQVIDFL
TVKLVLPEGTKNIHVDTPYEINRQPDELHYTYLDTFGRPVIIAHKSNLVEQHIQDIVVHY
TFNRILMLQEPLLVVGAFYILFFTVIIYVRLDFSITKDPAAEARMKVASITEQVLTLVNK
RLGLYRHFEEAVNKYKQSRDIGTLNSGRKTLEIEHRGLSADISALQSKLKAEGSDLAEKV
AEIQKLDGQVKDLALKASQEAERLVAGKVKKEVYIENDKHFTSKRQDLVSRIDNILDTL
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggacggcctcctctcccatatcatcctcttcgttgggctctgggcttccctgcggccg
gtgtatggcgactccctggtgaacgaggatgttaaacggtcgatagatttggggactcac
ttggccaaaatcacggccgatctgacgctgtccaacagcgggccctccccggcctcatcc
ttcatcctggcggtggagccgggcctggagaagcacctggcctacttcggagtcaccttg
aaatccgatgatgaagaagaaatttcattggctttggaagagacacgtgtcacagggcag
agtggcaagttcttcaaagtgaagttgggaacgcagctagctgctggtgccaaagtcagg
ctggcacttgaatctatatacacacatgtcttgcgccctttcccaactcacattgctcag
gctgagaagcaatttgtggtctttgagggcaatcactacttctactctccgtatctcacc
aagacccagaccactcgcgtcaagcttgcttcgaagaacgttgagagctacaccaagctt
ggtaaccccagcaaatctgaggacactgttgattacggaccattcaaagacattgaggcc
ttcagccaggatacgatgaggttgcattacgagaataacagcccttttctggctatcgtc
agcatgacccgtctaattgaggtgtcgcattggggtaatattgctgtggaggagaccatt
gatctgaagcactgcggcgcagtcctgaaagggccattctcacgctatgactaccagaga
cagccggacagtggcatctcatccgttaagtctttcaagaccatcctacctgctgccgcc
caggatgtttactatcgcgatgatattggtaacatctccaccagccacttggtagttctg
gatgattccgtggagatggaagtccgtcctcgcttcccgctcttcggcggctggaagact
cactatgtcattggatacaacctgcccagctatgagtatctttacaatctcggtgaccag
tacgctctgaagatgaggtttgttgatcatgtatttgatgatcaagtaattgattttctt
accgtgaaacttgtccttccagagggaacaaagaacattcacgtcgacactccatatgag
ataaaccgacagcctgatgagcttcactatacctacctggacacttttgggcggcctgtc
atcattgctcacaagtctaatctggtggagcagcatattcaggatattgttgttcactac
acattcaacaggatcttgatgctgcaggagcccctattggtggtcggagctttctacatt
ctcttcttcactgtcatcatttatgtgcgtttggatttctcaatcaccaaggacccagct
gcggaagccaggatgaaggtagcgtccatcacagaacaggttctgactttggtcaacaaa
aggctgggcttgtaccgccattttgaagaggctgtgaataagtacaagcagtcacgggac
attggcacgctgaatagtggccgcaagaccctggaaatagaacaccggggtctttctgcc
gacatcagcgccctgcagtcaaagctgaaggctgaaggatcagacctggctgagaaggtg
gctgagatccagaagctggatggccaggtgaaggatctggcactgaaggcatctcaggag
gcagagcgactggtggctggcaaagtgaagaaggaggtgtacattgagaatgacaaacac
ttcacctccaagcggcaagacctggtgtccaggattgataacatcttggacaccttgtag
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