Corynebacterium amycolatum: I6I65_00615
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Entry
I6I65_00615 CDS
T07354
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
camc
Corynebacterium amycolatum
Pathway
camc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
camc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I6I65_00615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
camc03019
]
I6I65_00615
03009 Ribosome biogenesis [BR:
camc03009
]
I6I65_00615
Enzymes [BR:
camc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
I6I65_00615
Messenger RNA biogenesis [BR:
camc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
I6I65_00615
Ribosome biogenesis [BR:
camc03009
]
Prokaryotic type
rRNA helicases
I6I65_00615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
UvrA_inter
Cas3-like_C_2
Transketolase_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QQU97928
LinkDB
All DBs
Position
136752..138899
Genome browser
AA seq
715 aa
AA seq
DB search
MANNEMNGSVEENREDQRENQREDAIVKAEDVVAGEAPVAGEKAAEEKTEKVEKTAEAEK
KAEKNKHDNDDDTVGFDELELPDDIVNAVRKVGFETPSPIQAATIPTLMSGRDVVGLAQT
GTGKTAAFALPILARIDRSVRAPQALVLAPTRELALQVADSFQSFADHLGKIQVLPIYGG
QSYGVQLSGLRRGAQIIVGTPGRVIDHLEKGSLDISDLRFLVLDEADEMLQMGFQEDVER
ILADTPDDKQVALFSATMPASIRRLSKQYLREPEEITVKSQTRTADNIRQRFLMVSHRNK
LDALTRILEVEEFEAMIMFVRTKHETEELAEKLRARGFSAAAINGDIPQTLRERTIDQLK
DGRLDILVATDVAARGLDVDRISHVVNYDIPHDTESYVHRIGRTGRAGRSGEALLFVTPR
EGRLLRSIERATKSQLHEMKLPTVDEVNDSRKQKFADDLTEALADSQVPVFRELIEEYAE
EHDTPLVDIAAAIAAQAQSGDFLMKEPPRGRRHDRDRDRFDRDRNRGRDGRSRGERGQGK
RADLVEFEREGTATYRISVGRRQHVRPGAIVGAIANEGGLSSKDFGHIDIRGDHTLVELP
ANLPQEVINNLSDTRISGQLIGLKLDDGTSVDDSDDYRGGRGGYRGNRRDGGRGRGGYRG
GRGRDDRRGGGRGRGSYRGNFDDGDGFGGRGRGRGRSGYRGDRDDRRGGYRGGRR
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggctaataatgaaatgaatggcagcgtcgaggaaaatcgcgaggatcagcgcgaaaac
cagcgcgaggacgcaattgtgaaggccgaggatgtagtggccggggaagcaccagtggcc
ggagagaaggccgctgaggaaaagaccgagaaggtagaaaagactgccgaggccgaaaag
aaggccgaaaagaacaaacacgacaacgatgacgacaccgtcggcttcgatgagctcgag
ctgccggatgacattgtcaatgcagttcgcaaggttgggtttgagactccttccccaatt
caggctgcaactatcccgactctgatgagcggccgcgacgtcgtcggcctggctcagact
ggtactggtaagaccgcggcgttcgcgctgccgattctggctcgcattgatcgctccgtc
cgcgcaccgcaggcgctggtgctcgctccgacccgtgagctggcactgcaggttgcggat
tccttccagtcgtttgctgatcacctgggcaagattcaggtcctgccaatctacggtggt
cagtcctacggagtgcagctgtcgggtctgcgtcgaggtgcacagatcatcgtcggcacg
ccgggtcgtgtcattgaccacctggaaaagggctcgttggacatctccgacctgcgcttc
ctggtactggacgaggccgatgagatgctgcagatgggtttccaggaggatgtcgagcgc
attcttgccgacactccggatgacaagcaggtcgcactgttctcggctaccatgccggct
tcgattcgtcgcctgtccaagcagtacctgagggagccggaagagatcaccgtcaagtcc
cagactcgcactgcggacaatattcgccagcgcttcctgatggtcagccaccgcaacaag
ctggacgcgctgacccgcatcctcgaggtcgaggaatttgaagcgatgatcatgttcgtg
cgtaccaagcacgagaccgaggagctcgccgagaagctgcgtgcccgcggattctccgct
gccgccatcaacggcgacatcccgcagactctgcgtgagcgcacgattgatcagctcaag
gacggtcgcctggacatcctggtggcaaccgatgttgctgctcgtggcctggacgttgac
cgcatttcccacgtggtcaactacgacattccgcacgacaccgagtcctacgtccaccgc
attggtcgtaccggccgcgctggccgctccggcgaggcactgctctttgtcactccgcgt
gaggggcgcctgctgcgctcgattgagcgggcaaccaagtcgcagctgcacgagatgaag
ctgccgaccgtcgatgaggtcaacgactctcgcaagcagaagttcgctgatgatttgact
gaggcgcttgctgattcgcaggttccggtcttccgcgagctcatcgaggagtacgctgaa
gagcacgacactccgctggtcgatatcgccgctgctatcgctgcgcaggcacagtcgggc
gacttcctgatgaaggagccaccgcgtggccgtcgtcatgatcgtgaccgtgatcgtttc
gaccgcgaccgcaaccgtggccgcgatggtcgctcccgtggtgagcgcggtcagggcaag
cgcgccgacctggtcgaattcgaacgcgagggcaccgcaacctaccgcatcagcgtcggt
cgtcgccagcacgtccgcccgggtgccattgtgggcgccatcgccaacgagggcggcctg
tcatcaaaggacttcggacacatcgacatccgtggcgaccacaccctggtcgaactgccg
gccaacctgccgcaagaagtcatcaacaacctctccgatacccgcatttccggccagctc
attgggctgaagcttgacgacggcacctcggtcgacgacagcgatgactaccgcggtggc
cgtggtggctaccgtggcaatcgtcgtgatggcggtcgcggtcgcggaggataccgtggt
ggtcgtggccgcgatgaccgccgtggtggcggacgtggccggggtagctaccgtggaaac
ttcgatgacggtgacggtttcggcggtcgtggtcgcggacgcggtcgcagtggctaccgt
ggtgaccgggatgaccgccgcggtggttaccgaggcggacgccgctag
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