KEGG   Corynebacterium amycolatum: I6I65_01910
Entry
I6I65_01910       CDS       T07354                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03086  RNA polymerase primary sigma factor
Organism
camc  Corynebacterium amycolatum
Brite
KEGG Orthology (KO) [BR:camc00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    I6I65_01910
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:camc03021]
    I6I65_01910
Transcription machinery [BR:camc03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     I6I65_01910
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 HC2
Other DBs
NCBI-ProteinID: QQU98805
LinkDB
Position
complement(437974..439536)
AA seq 520 aa
MGQAQDQSTGSGTGSATPAKKAVKKAIKKAVKKTVAKKTAAKKTAAKKTAAKKTAATETA
AKKATAKKATAKKTVKKAAKKSVAKKTTRKAAAKKATKRTTAAKATAAKAAAAKAAAAKA
KDAQALDATENEELEDEELDHDLEQERDYDPDLDDDLEDDDFHDDLDDDDLEDDEEEDDE
DEDEDEDEEDEGDEVWNEDESTRLRQARKDAALTASADSVRAYLKQIGKVALLTAEEEVS
LAKRIEAGLYAQYKIDEAKEAGERIAYAQKRDLREISRDGQRAKNHLLEANLRLVVSLAK
RYTGRGMAFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQARTIRI
PVHMVEVINKLGRIQRELLQDLGREPTPEELAKEMDITEEKVLEIQQYAREPISLDQTIG
DEGDSQLGDFIEDSEAVIAVDAVSFTLLQDQLGDVLETLSEREAGVVRLRFGLTDGMPRT
LDEIGQVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLE
NT seq 1563 nt   +upstreamnt  +downstreamnt
ctggggcaagctcaggaccaatccaccgggagtggcaccggttcagctactcctgcaaag
aaggctgtaaagaaggccatcaagaaagcagtgaagaagaccgtggcaaagaagactgcc
gcgaagaaaactgccgccaagaagacggctgccaaaaagacagctgctaccgagactgcg
gcgaaaaaggcgaccgctaagaaggcaacggccaagaagaccgtgaagaaggcggctaag
aagtcggtcgctaagaagaccacacgtaaggccgccgccaagaaggcaactaagcggaca
acggctgcgaaggccactgcggccaaggctgctgcagcgaaggctgctgcagcgaaggcg
aaggacgcgcaggctctcgacgcaactgagaacgaagagctcgaggacgaggaactcgat
cacgacttggagcaggagcgggactacgacccagatctggatgatgatctcgaagacgat
gattttcacgacgatctggatgatgacgacctcgaagatgatgaagaagaggacgacgag
gacgaagacgaagacgaggatgaagaggacgagggcgacgaggtctggaacgaggacgag
tccactcgtctgcgtcaggcccgcaaggatgctgccctcaccgcctccgctgactctgtc
cgcgcctacctcaagcagattggtaaggtcgcgctgctgactgccgaggaagaagtcagt
ctggcaaagcgcatcgaggctggtctgtatgcgcagtacaagattgacgaggccaaggaa
gccggcgagcgcatcgcttacgctcagaagcgcgacttgcgcgagatttctcgcgacggt
cagcgcgccaagaaccacctgctcgaggccaacctccgtctcgtggtatccctggcaaag
cgctacaccggccgtggcatggctttcctcgacttgattcaggagggcaacctcggcctg
attcgcgccgtcgagaagttcgactacaccaagggctacaagttctccacgtacgcaacg
tggtggattcgccaggccattactcgtgcaatggccgaccaggctcgaaccattcgtatt
ccggttcacatggtcgaggtcattaataagctcggccgtatccagcgtgagctgctccag
gatctcggccgcgagcccactccggaagagctcgctaaggaaatggatatcaccgaggaa
aaggttctcgagattcagcagtacgctcgtgaacccatttcgctagaccagaccatcggt
gacgagggcgactcccagctcggtgacttcattgaggactccgaggcagtcatcgccgtg
gacgccgtgagcttcacgctcctccaagatcagcttggcgacgttctggagactctctcc
gaacgtgaagccggtgtcgtccgtctgcgcttcggccttaccgacggcatgccacgtact
cttgacgagattggccaggtctacggtgtgacacgcgagcgcatccgtcagattgagtcc
aaaacgatgtccaagctacgtcacccatcgcgttcgcaggttctgcgtgactacttggag
taa

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