Corynebacterium amycolatum: I6I65_09450
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Entry
I6I65_09450 CDS
T07354
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
camc
Corynebacterium amycolatum
Pathway
camc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
camc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
I6I65_09450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
camc03021
]
I6I65_09450
03400 DNA repair and recombination proteins [BR:
camc03400
]
I6I65_09450
Enzymes [BR:
camc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
I6I65_09450
Transcription machinery [BR:
camc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
I6I65_09450
DNA repair and recombination proteins [BR:
camc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
I6I65_09450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
QQU97562
LinkDB
All DBs
Position
2146478..2147503
Genome browser
AA seq
341 aa
AA seq
DB search
MLISQRPTLTEDYIDSSRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTIPGVKEDVSDIILNIKGLVLSSEFDEPATVYLRREGAGAVTAADIECPAGVEIHN
PDHHIATLNESGRLDIEMIVERGRGYVPATPNSGGEIGRIPMDQIYSPVLKVSYKVEATR
VEQRTDFDKLIIDVETKNSITARDAMASAGKTLVELFGLARELNEAAEGIEIGPSPREAE
DVAAYQTPIEDLDFSMRSYNCLKREEIHTVGELAARTESDLLDIRNFGDKSINEVKEKLA
ELGLALKDSPNNFDPAAVADLDAASGDDADWTDGASAGYDE
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgctcatttcccagcgcccaacgctgactgaggactacattgattcctctcgctcccgg
ttcgttatcgaaccgctggagccgggtttcggttacaccctcggtaactctcttcgtcgt
acgttgctgtcgtccattccgggcgctgcagtcaccagcatccgcatcgacggtgtgctg
cacgagttcaccactatcccgggcgtgaaggaagatgtctccgacatcatcctgaacatc
aagggtctggtgctctcgagcgagttcgacgagccggctaccgtttacctgcgtcgcgaa
ggtgcaggcgcggtgaccgctgcagacattgagtgcccagcaggtgtggagattcataac
ccggatcaccacatcgctactctcaacgaatccggtcgcttggatattgagatgatcgtt
gaacgtggtcgtggctacgtgccggcgaccccgaactccggtggcgaaattggccgcatt
ccgatggaccagatttactcgccagttctgaaggtcagctacaaggtggaggctactcgt
gttgagcagcgcaccgactttgacaagctgatcatcgatgtcgagaccaagaactcgatc
accgcccgcgacgcaatggcgtcggcaggcaagactctggttgagctgtttggtctggca
cgcgagctgaacgaggctgctgagggcatcgagattggcccgagcccgcgcgaggctgag
gatgtcgctgcgtaccagactccgattgaggatctggacttctctatgcgctcctacaac
tgcctaaagcgtgaggagatccacactgtcggtgagctcgctgctcgtaccgagtcggat
ctgctggatatccgcaacttcggtgacaagtccatcaatgaggtcaaggaaaagctcgct
gagcttggcctggctctgaaggattccccgaacaacttcgacccggctgctgtcgctgat
ttggacgctgcctcgggcgatgacgctgactggactgatggcgcaagcgctggctacgac
gagtag
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