Corynebacterium ammoniagenes: CAMM_02345
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Entry
CAMM_02345 CDS
T05164
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
camg
Corynebacterium ammoniagenes
Pathway
camg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
camg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CAMM_02345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
camg03021
]
CAMM_02345
03400 DNA repair and recombination proteins [BR:
camg03400
]
CAMM_02345
Enzymes [BR:
camg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CAMM_02345
Transcription machinery [BR:
camg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CAMM_02345
DNA repair and recombination proteins [BR:
camg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CAMM_02345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
APT81805
LinkDB
All DBs
Position
472898..476893
Genome browser
AA seq
1331 aa
AA seq
DB search
MFDVNLFDELRIGLATADDIRRWSKGEVKKPETINYRTLKPEKDGLFCERIFGPTRDWEC
QCGKYKRVRYKGIICERCGVEVTKSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLERIIYFAANIITSVDDEARHNDLSTLEGEMLLEKKDVEDDVNAEIAERAAKLEDD
LAALEAEGAKADARRKVQNAADKEMQHIRERGEREVARLDEIWNTFNKLAPKQMIIDETI
YEELVDRYEDYFTGGMGAEAIQTLIRNFDLDAEAEELRDVINNGKGQKKMRALKRLKVVA
AFQRSGNDPAGMVLDSIPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRMIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVSGPGSRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLKLHECGLPKLMALELFKPFVMKRLVENDYAQNIKSAKRMVERQR
PEVWDVLEEAISEHPVLLNRAPTLHRLGIQAFEPKLVEGKAIQLHPLACEAFNADFDGDQ
MAVHLPLSAEAQAEARVLMLSSNNILSPASGKPLAMPRLDMVTGLYFLTMNKREDEIGGN
GRYAPADENGPAQGMYSSYAEAIMAYDRGVLGLQAPIKVRLDHLRPTEAIEAAQFPDGWT
KGESWLAETTLGRIMFNELLPWNYPYLEGVMVRKGGSKDIVLLGDVINDLAIKYPMITVA
QVLDKMKDAGFYWATRSCVTITMHDVLVLPNKTEMLESYEKEAERIERKYWDQGALTERE
RYDRLVELWKDATDSVGNAVESLYPDDNPIPMIVKSGAAGNMRQIWTLAGMKGMVVNSKG
DYITRPIKTSFREGLSVLEYFNNSHGSRKGLADTALRTADSGYLTRRLVDVAQDVIVRED
DCGTRQGVRVPIAEEIAEDTFAIHELWETSASGRVVATDVKDSEGNVVAEAGADLTDELT
DKLVKAGIPEIKVRSVLTCQTPAGVCAKCYGKSMASGQLVDIGEAVGIVAAQSIGEPGTQ
LTMRTFHQGGVGGDITGGLPRVQELFEARNPKNRAPIASVDGTVSLSDEGNFWTLTITPD
DGSDNVVYEKLSKRQGLAQVRRPMESNPNAMIERSLRDGDHVTTGLRLMRGAADPHDVLE
VLGRRGVEKHLIDEVQAVYRTQGVAIHDKHIEIIIRQMLRRGTVIDSGNTDLLPGTLVDL
SEARQINSAMQAEGKEPAQLRSEIMGITKASLATESWLSAASFQETTRVLTDAAINKRSD
KLIGLKENVIIGKLIPAGTGISRYRNISVKPTEAARNAAYSIPTYGDSIYGDDGFGEFTG
ASVPLDEDFTF
NT seq
3996 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgacgtaaatctcttcgacgagcttcgtattggactggccaccgccgacgacatc
cgccgttggtctaagggcgaggtaaagaagcctgagaccatcaactaccgcaccctgaag
ccagaaaaggacggccttttctgtgagcgtatcttcggccctacccgtgactgggagtgc
cagtgcggtaaatacaagcgtgtccgctacaagggcatcatttgtgagcgttgtggcgtt
gaggtcaccaagtccaaggttcgtcgtgaacgcatgggccacattgagcttgctgctccc
gtgacccacatctggtacttcaagggtgtcccatcccgtttgggctacctgttggacctt
gctccaaaggacctggagcgcatcatctacttcgcagccaacatcatcacgtccgttgat
gacgaggctcgccacaacgacctgtcgactctcgaaggcgaaatgcttttggagaagaag
gacgttgaagatgacgtcaatgctgaaattgctgagcgtgcagccaagctcgaagatgac
ctggctgctctcgaagcagaaggcgcgaaggctgacgcacgccgcaaggttcagaatgct
gctgataaggaaatgcagcacattcgtgaacgcggtgagcgtgaggtcgcacgtctggat
gaaatctggaacaccttcaacaagcttgctccaaagcagatgatcattgatgagaccatc
tacgaagagctggttgaccgctacgaagattacttcaccggcggcatgggtgcggaagca
atccagaccctgattcgcaacttcgatctcgatgcagaggccgaagagctgcgcgacgtc
atcaacaatggcaagggccagaagaagatgcgtgcactcaagcgcctcaaggttgttgct
gcatttcagcgctcgggcaatgacccagctggcatggtcctggactctatcccagtgatc
ccaccagagctgcgccccatggtgcagctcgacggtggacgctttgcaacctctgacttg
aacgacctttaccgtcgtgtcatcaaccgcaataaccgcctcaagcgcatgatcgatctc
ggcgcacctgagatcatcgtcaacaacgaaaagcgcatgctgcaggaatctgtagacgcg
ttgttcgataacggtcgtcgtggtcgtccagtttctggtccaggcagccgtccgctgaag
tccttgagtgacttgctcaagggtaagcagggacgtttccgtcagaacctgctgggtaag
cgtgttgactactccggtcgttccgtcattattgtcggtcctcagctgaagctgcacgag
tgtggtcttccgaagctgatggcgctggagctgtttaagccattcgttatgaagcgtctg
gtggaaaacgactacgcgcagaacatcaagtctgcaaagcgcatggtcgagcgtcagcgt
ccagaggtctgggacgttttggaagaagcaatttccgagcacccagttcttctcaaccgt
gcaccaaccctgcaccgcctgggcattcaggcattcgagccgaagctggttgagggtaag
gctattcagctgcacccactggcttgtgaagcattcaacgccgacttcgacggtgaccag
atggcagttcacctgccactgtccgcagaagcacaggctgaggctcgtgtgctgatgctg
tcctccaacaacattttgtccccggcatctggtaagccactggctatgccacgtctggac
atggtgactggtttgtacttcctcaccatgaacaagcgcgaggacgaaattggtggcaac
ggtcgctacgctccagcggatgagaacggcccagcacagggcatgtactcctcctatgcg
gaagcgatcatggcgtatgaccgcggcgttcttggcctgcaggcaccgatcaaggttcgc
cttgaccacctgcgcccaaccgaggcaattgaggcagctcaattcccagacggttggacc
aagggcgagtcctggttggctgaaaccaccctgggccgcatcatgttcaacgagcttctg
ccatggaactacccatacctagagggcgtcatggtccgtaagggtggctccaaggacatt
gttctgttgggcgatgtcattaatgacctcgctatcaagtacccaatgatcaccgttgct
caggtactggacaagatgaaggatgccggtttctactgggcaacccgctcttgtgtcacc
attaccatgcacgacgttctggttcttccaaacaagaccgagatgctcgagtcttacgag
aaggaagcagagcgcatcgagcgcaagtactgggatcagggtgcgctgactgagcgtgag
cgctacgaccgtctggttgagctgtggaaggatgcaactgactccgtgggtaacgcggtc
gagtcactgtatccagatgacaacccaattccgatgatcgtgaagtctggtgcagcaggt
aacatgcgtcagatctggaccttggccggtatgaagggcatggttgtgaactctaagggt
gactacatcacccgtccgattaagacttccttccgtgaaggtctgtcggttctggagtac
ttcaacaactcccacggttcccgtaagggtctggccgataccgcgctgcgtaccgctgac
tcgggctacctgacccgtcgtctggttgacgttgcgcaggatgtcatcgttcgcgaagac
gactgtggcacccgtcagggtgttcgcgttccaatcgcggaagagattgcagaagacacc
ttcgcaatccacgagctgtgggagacctcagcttcgggccgcgttgtcgcaacagatgtc
aaggattccgagggcaatgtcgtcgccgaagctggcgcagacttgaccgacgaactcact
gacaagctggttaaggctggcatcccagagatcaaggtccgctcggttctgacttgtcag
accccagccggcgtctgtgcgaagtgctacggcaagtccatggcttctggccagctggtc
gatatcggcgaagcagtcggtattgttgctgctcagtccattggtgagcctggtacccag
ctgaccatgcgtaccttccaccagggtggtgtcggtggcgatattaccggcggtctgcca
cgtgttcaggaactatttgaggcacgtaacccgaagaaccgtgcaccaatcgcttctgtc
gatggcaccgtgtcactgtccgatgaaggaaacttctggacgttgaccattaccccagac
gatggttcggacaatgtggtctacgagaagctgtcgaagcgtcagggcctggctcaggtt
cgtcgcccgatggagtccaacccgaatgcgatgatcgagcgctccttgcgcgacggtgac
catgtcaccaccggtcttcgcttgatgcgcggtgcagctgacccacacgacgtacttgag
gttctcggtcgtcgtggcgtggaaaagcacctcattgatgaggttcaggctgtttaccgt
actcagggtgtagccatccacgacaagcacatcgagatcatcatccgtcagatgctgcgt
cgcggtactgtcatcgactcgggtaacactgacttgttgccaggtactttggttgacctt
tctgaggctcgccagatcaactccgctatgcaggcagagggcaaggaaccagctcagctg
cgttctgagattatgggtattaccaaggcttccttggctaccgagtcttggctgtctgct
gcgtccttccaggagaccacgcgtgtgcttaccgatgccgctattaacaagcgctctgat
aagctcatcggtctcaaggagaacgtcatcatcggtaagctgatcccagctggtaccggt
atctcccgttaccgcaatatctccgtcaagccaaccgaggctgcccgcaacgcggcatac
tcgattccaacttacggcgattccatctacggcgacgatggcttcggtgaattcaccggc
gcttccgtcccactggatgaggacttcaccttctag
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