Corynebacterium ammoniagenes: CAMM_05380
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Entry
CAMM_05380 CDS
T05164
Name
(GenBank) 5-hydroxymethyluracil DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
camg
Corynebacterium ammoniagenes
Pathway
camg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
camg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CAMM_05380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
camg03400
]
CAMM_05380
Enzymes [BR:
camg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CAMM_05380
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CAMM_05380
DNA repair and recombination proteins [BR:
camg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CAMM_05380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
APT82370
LinkDB
All DBs
Position
1161908..1162720
Genome browser
AA seq
270 aa
AA seq
DB search
MPELPEVEVVRRGLEPHIVDHAFKSVEILHPRANRGQDEPLGALLHNRVVSAVARRGKYL
WCELDGHTEREDDVLFMHLGMSGQLRIGHTDSKHVRIRAHLTDGVDLSFIDQRTFGYWLV
APKAKIDHIGHDPLSPDFDIVAAARKLRTKKTHVKTALLDQTIASGIGNIYADEALWRAH
VSPLRKANRLLQREAVAIYEAAKEVMLEALAQGGTSFDALYVNVNGESGYFARSLHVYGR
TDEPCDTCGGPISRVVLNARSSHFCPLCQR
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagttaccagaagtagaagttgttcgacgcggtcttgagccccacatcgtggat
catgcgttcaaatcagtagagatcttgcacccgcgagctaataggggacaggacgagccg
ctgggcgcgcttttgcataaccgtgtcgtcagcgcggttgcgcgacgcggtaaatatctg
tggtgtgaattagatggacacaccgagcgtgaagatgatgttttattcatgcatcttggc
atgtccggtcagcttcgaatcgggcacactgattccaagcatgtgcgcatacgcgcgcat
ctcaccgatggcgtggatttaagcttcatcgaccagcgaacctttggctactggttagtg
gcacccaaagccaaaattgatcacattgggcacgacccgttaagtcctgatttcgatatc
gtcgcggccgcgcggaaactgcgaacgaagaagacacatgtgaaaactgcgctgctcgat
cagaccattgcctcagggatcggcaatatttatgccgatgaagcactgtggcgcgcgcac
gtttcaccattgcgcaaagccaaccggttactgcagcgcgaggctgtcgctatttatgaa
gcggcgaaagaggtcatgctcgaagcgctcgcgcagggcggaaccagcttcgacgcgctc
tatgtcaacgtcaatggtgaatctggatactttgcgcgctcgctacatgtgtatggccgc
accgatgagccatgcgatacctgcgggggtccaatctcccgggtggtgctcaatgcacgc
tcctcacatttttgcccgctgtgccagcgctag
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