Corynebacterium ammoniagenes: CAMM_05485
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Entry
CAMM_05485 CDS
T05164
Name
(GenBank) transferase
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
camg
Corynebacterium ammoniagenes
Brite
KEGG Orthology (KO) [BR:
camg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
camg03016
]
CAMM_05485
Enzymes [BR:
camg01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
CAMM_05485
Transfer RNA biogenesis [BR:
camg03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
CAMM_05485
Prokaryotic type
tRNA splicing ligases
CAMM_05485
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
APT82391
UniProt:
A0ABN0AIG7
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All DBs
Position
complement(1187455..1188660)
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AA seq
401 aa
AA seq
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MSRSRGPKRAAPRKFNDKIHVETFASVLEPAVMEQAEQLAGMPFIHPHVALMPDAHVGMG
SSVGTVFGTIGAVIPAAVGVDIGCGMIGVRTQFTAADLPKDLIPLRDALEAAIPLSPGNY
NEWHLEGSADRRARELAQMAENDEVDLSHSPKWRQQLGSLGGGNHFIELCLDEQDRVWMF
LHSGSRGVGNKIAQKHIAAAQEQCDKHWVRLPHRDLAYLTEGTQEFDDYITELHWAQHFA
YLNREEMMDRFARCLSEFMGADVVEAERINCHHNYTVKEEHFSKQVWLTRKGAVLADLGV
KALIPGSMGTRSYVVEGKGFAPALRSAPHGAGRRYSRTEARKRFTTEDLDKRMEGIVYRP
GKAWIDEIPDAYKDIDQVMADATKLVDVQHELRQVLNVKGT
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgttctcgcggccccaaacgggctgcacctcgcaaattcaatgacaagatccac
gtggagactttcgcttccgtgctagagcccgccgtaatggagcaggctgaacaacttgct
ggcatgccgtttatccacccgcacgtcgcgctaatgcccgatgctcacgtgggcatgggg
tcttctgttggcaccgtatttggcacgatcggcgccgtcattcctgctgccgtcggtgtt
gatatcggctgcggcatgattggcgtgcgcacgcagtttactgctgcggacttgccgaaa
gatctaattccgctgcgcgatgcgctggaagctgccattccgctgtctcccggaaactat
aacgagtggcacctagaaggctccgcggatcgccgagcacgcgagctggcacagatggcc
gagaatgacgaggttgacctatcgcattctcccaagtggcgccagcagctaggttccctc
ggcggcggaaatcacttcattgaattgtgcttggatgaacaagaccgagtctggatgttt
ttgcactctggctcgcgcggcgtgggcaataagattgcgcaaaagcacatcgcggcagca
caggaacagtgcgacaagcactgggtgcgcttgcctcatcgtgacctggcctacttaacc
gaaggtacccaggaattcgatgactacatcacggagcttcactgggcgcagcactttgct
tacctcaaccgtgaggaaatgatggataggttcgcacgctgcctgtcggaattcatgggt
gcggatgtggtggaagcagaaagaattaactgccaccacaactacacggtcaaggaagag
cactttagtaaacaggtgtggctcacgcgcaagggagcagtgcttgccgatctcggcgtc
aaagcactcatcccgggctccatgggtacgcgttcttatgtcgtcgaagggaaaggcttt
gctccggcgctgcgctccgcaccgcacggtgctggccgacgctactctcgcacggaagct
cgcaagcgctttaccaccgaagatttagacaagcgcatggaaggtattgtctaccgtccg
ggcaaggcctggattgatgaaataccggatgcttataaagacatcgaccaagtaatggct
gatgccaccaagcttgtcgatgtccagcacgagctacgccaggtgctcaacgtcaagggc
acctaa
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