Corynebacterium ammoniagenes: CAMM_09850
Help
Entry
CAMM_09850 CDS
T05164
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
camg
Corynebacterium ammoniagenes
Pathway
camg03420
Nucleotide excision repair
camg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
camg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CAMM_09850
03430 Mismatch repair
CAMM_09850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
camg03400
]
CAMM_09850
Enzymes [BR:
camg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CAMM_09850
DNA repair and recombination proteins [BR:
camg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CAMM_09850
MMR (mismatch excision repair)
Other MMR factors
CAMM_09850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
DUF7553
Motif
Other DBs
NCBI-ProteinID:
APT83200
LinkDB
All DBs
Position
complement(2138345..2141608)
Genome browser
AA seq
1087 aa
AA seq
DB search
MSTPKFSPADIAAAVGKKFAPTAEQATVIEGGLGPKLVTAGAGAGKTETMASRVVSLVAN
GYVRPEQVLGLTFTRKAAQQLEQRIRNSLIQLRDTGLFAPGSDVAQALESIAPKVMTYDA
YAGELVSEYGLYLPVEPSARLITDAERFAIAHEIVSNHSGEMTTTTSVATVAQNVLKLAD
NMGNVLMSQDDIREHARIMLSDATELPKARKSGPEFSKDLQKILDVQKIRVEYLELVEEL
QRQQHELGVVSFGEQMTFAARVASAQPGIGAIQRQRYRVVMLDEYQDTSHSQRVLLRSLF
GGTPHPELSVTAVGDPMQAIYGWRGATTENLNAFIRDFPLEDDTPAPQDQLTVSWRNPSR
VLELANVVADDIFAGAHPRPVDRLSARPGADEGDVQLGYFETQEQEREFVALHMKKIYEQ
SQQVEIDDTGRATKKSLSAAILVRTNRHAAEIGRHLQAHGVPYEIVGLGGLLWEPEIQDM
VAIATMLVRPQDSAAALRILAGPLCGLGMTDINALHKRVENMTGAAEERIVYSPGDDPLD
HLRAQLQQQVDNATTKRPEQILGLADAVADMGEAERYTDEGRERIEKLASKLRHLRGYSL
GKSLSDLFADIETTFNLRTEVLARDSVGGATHLDKFADIVASYQGDTVGGLLDYLDLARE
HENGLDPGEVPAVDDRVLVLTVHKSKGLEWEHVCVLHADSTTYGAKANSFITKVEQVPDE
DDVIEPEPQYDKNGEPKPITRTDYGKAAKALEQQYKADNAEESARLFYVAMTRTEKSLTV
TGGGTNSFKPGHGSKKGPYLYLEMLAEKFPDLVVEWTVPDEEPEDATGQGLESGVFPFLE
PTPAAVRGAKLVEAARADLPEAQSGEEFGLWESDATALIEEHRALTTPVLEVPMPSELTA
SDVVNLATDPDEFARRRRRPVPFKPNSYAKRGTAFHSWLEERFGMEALLEEDELPGTGEV
PVADVEALKEKFLESEWANRSPYAVETPFRFNSGGQILNGRMDAVFKEPDGSWFVVDWKT
GRPPQGRDMEHAALQLAIYREGWRRIIADGQPIRAGFHYVSDNFTFEPRNLPDGEELARL
LSTVTTK
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactcctaaattttctcccgcagatatcgctgcggcggtgggaaagaaattcgcg
cccaccgcagaacaagccacggttattgaaggtggcctgggaccgaagctggtcaccgcc
ggcgccggcgcgggcaaaacagagaccatggcctcgcgtgtggtgtcgttggtggccaat
ggttatgttcgccccgagcaagtactgggactaacctttacccgcaaagccgcccagcag
ctggaacaaagaatccgaaactcgctgatccagttgcgcgataccggcctgttcgcaccc
ggcagcgacgtcgcgcaggcgttggaatctattgcaccgaaggtgatgacatatgacgca
tatgccggagaattggtcagtgaatatggcctgtacttaccggtagaacccagcgcgcgg
ttgattactgatgctgagcgctttgccatcgcgcacgagattgtcagcaaccattccggc
gaaatgaccacgacgacatcggtggccacggtggcgcaaaacgtgctgaagttggcggac
aatatgggcaatgtgctcatgagccaggacgatattcgagaacacgcgcgcatcatgctt
agcgatgccacggaattgccgaaggcacgaaaaagcgggccggaattttccaaagatctg
caaaagattttggacgtgcaaaaaatccgcgtggagtatttggagctcgttgaagaactg
cagcgtcaacagcacgaacttggtgtggtcagcttcggggagcaaatgactttcgcagcg
cgtgtggcctctgcacagccgggcatcggagcgattcagcgccagcgctaccgcgtggtc
atgctggatgaataccaggacacctcgcactcacagcgggtgttgttgcgtagtcttttt
ggcggtacgccgcatccggagttgtccgtcacggccgtcggtgatccgatgcaggctatt
tatggctggcgtggagctacgacagaaaacctcaacgcgtttatccgggacttcccactc
gaagatgacaccccggcgccacaggaccaattgaccgtgtcctggcgcaatccctcccgc
gtgctggagctagccaatgtcgtcgctgacgatatcttcgccggagcacatccacggcct
gtggacaggctcagtgcccggcccggcgccgatgagggagatgtgcagctgggctatttt
gaaacccaggaacaagaacgcgaattcgtcgcgttgcacatgaagaaaatctacgagcaa
tcccaacaagtcgagattgatgacacaggacgtgcgacaaagaaaagtctgagcgcagct
attttggtgcgtaccaaccggcacgcggcagaaatcggccgacacttacaagcccatggc
gtgccctatgaaattgtcgggctcggcggattgctgtgggagcccgaaatccaagacatg
gtcgctattgccaccatgttggtgcggccccaagactcagccgcggccttgcgcatcctc
gctggaccactgtgcgggctgggcatgaccgatatcaacgccttgcataagcgcgtggaa
aatatgaccggtgctgcggaagagcgcatcgtgtattcaccaggtgatgacccgctagac
cacctgcgcgcacagctgcagcaacaggtagacaatgcaacgaccaagcgccccgagcaa
atactgggcttagccgacgcggtggccgatatgggcgaggcggagcggtataccgatgag
gggcgagagcgcatcgaaaagcttgcatcgaagctgcgccacctgcgtggttattctttg
ggcaaatccttaagtgacttgtttgcggatattgaaactaccttcaacctgcgcaccgag
gtcctggcgcgtgatagcgtcggtggtgccacccacttggataaatttgccgatattgtt
gccagctaccaaggcgataccgtgggcgggctgctggactacctggaccttgcgcgcgag
catgaaaatggcctggacccgggagaagtcccagcggttgatgaccgcgtcttggtgttg
accgtgcacaaatcaaagggtctggaatgggagcatgtctgcgtcctgcatgctgattcc
acgacctatggcgcgaaagccaatagctttattaccaaggtggagcaagtacctgatgaa
gatgacgtgattgaacctgagccacagtatgacaaaaatggtgagcctaaacccatcacg
cgtaccgattacggcaaagcggccaaggctttggaacagcaatacaaggcagataatgcc
gaagaatccgcgcgtttgttttatgtggctatgacgcgcacggaaaagtccttgacggta
accggtggtggcaccaatagctttaagcccggacatggttcgaagaagggaccttatctc
tacctggagatgttggccgaaaaattccccgacctggtggtggagtggaccgtgcccgac
gaagaaccggaagatgcgactggccaaggcctggaatcgggagtatttcctttcctcgag
cccacgcccgcggcggtgcgtggtgcaaaactcgtggaagctgctcgcgcggatttgccc
gaggcgcaatcgggtgaggagtttggcctgtgggaaagcgatgccacggccttgattgaa
gaacaccgcgcgctgacaacaccggtgttagaagtgccgatgcccagtgagctcactgcc
tccgacgtggtcaatttggccactgacccggatgagtttgcccgccgtcgccgccgtccc
gtgccctttaaacccaactcttatgccaagcgcggtacggccttccactcgtggttggaa
gaacgctttggcatggaggccttgctggaagaagatgagctgccaggaaccggcgaagtg
cccgtggctgatgtggaagcgctcaaggagaaattcctagaatccgaatgggccaaccgc
agcccgtatgcggtggaaacaccgtttcggttcaactctggtggacagattctcaacggc
cgcatggatgccgtattcaaggagccagatggttcctggtttgtggtggactggaaaacc
ggccggccgccacaaggccgcgatatggaacatgcggcgctgcagttggccatctaccgg
gaaggctggcgcagaattatcgccgatggccaacccattcgggcggggtttcactatgtt
tcggataatttcacctttgaacctcgtaatctgcccgacggggaggaacttgcgcgacta
ttgtctacggtgactacaaagtag
DBGET
integrated database retrieval system
