Cobetia amphilecti: LCW13_00040
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Entry
LCW13_00040 CDS
T07922
Symbol
glyS
Name
(GenBank) glycine--tRNA ligase subunit beta
KO
K01879
glycyl-tRNA synthetase beta chain [EC:
6.1.1.14
]
Organism
camh
Cobetia amphilecti
Pathway
camh00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
camh00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LCW13_00040 (glyS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
camh01007
]
LCW13_00040 (glyS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
camh03016
]
LCW13_00040 (glyS)
Enzymes [BR:
camh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
LCW13_00040 (glyS)
Amino acid related enzymes [BR:
camh01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
LCW13_00040 (glyS)
Transfer RNA biogenesis [BR:
camh03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
LCW13_00040 (glyS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synt_2f
DALR_1
Motif
Other DBs
NCBI-ProteinID:
UBU48734
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All DBs
Position
complement(9355..11424)
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AA seq
689 aa
AA seq
DB search
MASVNTLLIELGCEELPPGAIDALADSLANGLADGLRDAEVAFGQVRAYATPRRLAVMIE
SLAERQPDREIEKRGPAKAAAFKDGEPTRAVQGFARSCGVEVSDLIELETDKGTWLGYRH
TQPGEHLSALLPAMLEQVVARLPVPKNMRWGASRIEFSRPVHWLVALYGSEVIEASVLGL
DSGRTTFGHRFHAPQAITLAHAEDYLDALEDARVLANREVRRERIREQVQAEAEVYGANA
VIEEALLNEVNGLVEWPVALTGTFDERFLEVPAECLISSMKANQKYFHLLDNDGKLKPAF
ITVSNIESKDPQQVISGNEKVIRPRLGDAAFFYETDLRSTLESRREKLESVVFQQKLGSM
AEKARRSEAVARHIAERIGADVDHAARAAQLAKTDLVTEMVLEFPELQGIMGHYYARHDG
EDATVALALEEQYLPRFAGDAIPTTKAGMAIALADRLDTLTGIFGIGQRPTGAKDPFALR
RATIGVLNILIKGELDLDLRELLTVSAKQHRDLPKAEGLVEDVLEYMLDRFRAWASDEGM
GAELYLAVRTLKISNPLDFARRLRAVHAFGERPEAAALAAANKRVSNILAKAEHDGRTEV
DASLLSEPAEQALAEALTARGAEVAPLFAAARYQEALDALASLREPVDAFFDQVMVNADD
AAVRANRLAMLASLQGLFMGVADISLLTQ
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgtgaataccctgctgatcgaactgggctgcgaagaactgccgccgggcgcc
atcgacgcactcgctgacagcctcgccaacggcctcgccgatggcctgcgcgacgccgaa
gtcgccttcggtcaggtacgtgcctacgccacaccgcgtcgtctggcggtgatgatcgaa
tccctggccgagcgccagccggatcgcgagatcgagaagcgcgggccggccaaggccgcc
gccttcaaggatggcgaaccgacccgtgcggtgcagggcttcgcccgctcctgcggtgtc
gaagtcagtgatctgatcgagctggaaaccgacaagggcacctggctcggctatcgtcac
acccagccgggcgagcatctctccgccctgctgccggccatgctggagcaggtcgtggct
cgcctgccggtgccgaagaacatgcgctggggtgcctcacgcatcgagttctcgcgtccg
gtgcattggctggtcgcgctctacggcagcgaagtgatcgaggccagcgtgctcggcctc
gactccggtcgcaccaccttcggccaccgcttccatgcgccgcaggccatcacgctggcg
cacgccgaggactatctcgacgcgctggaagatgcccgcgtgctggccaaccgtgaggtg
cgccgtgagcgtatccgcgaacaggtccaggccgaggcggaagtctatggtgccaacgcc
gtcatcgaggaagccctgctcaacgaggtcaacggcctcgtggaatggccggtggcactg
acaggcaccttcgacgagcgcttcctggaagtgccggcggagtgtctgatctcctccatg
aaggccaaccagaagtacttccacctgctggacaacgacggcaagctcaagccggccttc
atcaccgtctccaatatcgagagcaaggacccacaacaggtcatctccggtaacgagaag
gtgattcgtccgcgtctgggcgatgccgccttcttctacgagaccgacctgcgcagcacg
ctggaatcgcgtcgcgagaagctcgagagcgtcgtcttccagcagaagctgggcagcatg
gccgagaaggcccgtcgcagcgaagccgtggcacgccacatcgcggaacgcatcggtgcc
gatgtcgaccacgccgcacgtgccgcacagctggccaagaccgacctggtcaccgagatg
gtgctggaattcccggaactgcagggcatcatgggccactactacgcccgtcacgatggc
gaagatgccaccgtcgctctcgcgctggaagaacagtatctgccgcgcttcgccggcgat
gcgatccccacgaccaaggccggcatggcgattgccctggccgaccgtctcgacaccctg
accggcatcttcggcatcggtcagcgtccgaccggcgccaaggacccgttcgcactgcgt
cgcgccaccatcggggtgctcaacatcctgatcaagggtgagctggacctcgacctgcgc
gagctgctgaccgtcagcgccaagcagcatcgtgatctgcccaaggccgaaggactggtc
gaggacgtgctcgagtacatgctcgatcgcttccgcgcctgggccagcgatgaaggcatg
ggtgccgaactgtacctggccgtgcgtaccctgaagatcagcaatccgctggacttcgcg
cgtcgtctgcgtgccgtgcacgccttcggcgaacgcccggaggccgctgctctggctgca
gccaacaagcgcgtctccaacatcctcgccaaggccgagcacgatggtcgcaccgaggtg
gatgcgagcctgttgagcgagccggccgagcaggcactggcagaggccctgacggcacgt
ggcgcggaagtggcaccgctgttcgccgcggcgcgctaccaggaggccctcgatgcactg
gccagcctgcgcgagccggtcgatgccttcttcgatcaggtgatggtcaacgccgacgat
gccgccgtgcgcgccaatcgtctggcgatgctggccagtctgcaaggcctgttcatgggt
gtggccgacatcagtctgctgacccaataa
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