Cobetia amphilecti: LCW13_00050
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Entry
LCW13_00050 CDS
T07922
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
camh
Cobetia amphilecti
Pathway
camh00541
Biosynthesis of various nucleotide sugars
camh01100
Metabolic pathways
camh01250
Biosynthesis of nucleotide sugars
Module
camh_M00064
ADP-L-glycero-D-manno-heptose biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
camh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LCW13_00050 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
camh01005
]
LCW13_00050 (rfaD)
Enzymes [BR:
camh01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
LCW13_00050 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
camh01005
]
Core region
LCW13_00050 (rfaD)
BRITE hierarchy
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
ThiF
KR
Motif
Other DBs
NCBI-ProteinID:
UBU48736
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Position
12553..13509
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AA seq
318 aa
AA seq
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MIVVTGGAGFIGANIVKALNDRGRTDILVVDDLSDGTKFVNLADLTIADYLDKDDFLIRV
QSSLMGEYAELPKIEAIFHEGACSDTTEWDGQFMLENNFEYSKVLLNFCEANQIPFLYAS
SAATYGDSQVFKETPEFEGPLNVYGYSKLLFDQHVRQRWDSLTTQVVGFRYFNVYGPREQ
HKGKMASVAYHHHTQVKAGENPKLFGAYDGYDAGMQSRDFVYVGDVVDVNLWFLDHPEAS
GIFNLGTGRAEPFKAIAETVIEYYEKGEIEYIDFPENLKGRYQSFTRADIGKLRKAGCNV
EFKTVAQGTRAYLEWLNR
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtcgttaccggaggcgccggcttcatcggtgccaatatcgtcaaggcactcaat
gaccgcggccgtaccgatatcctggtggtggatgacctgagtgacggcaccaagttcgtc
aatctggcggacctgaccatcgccgattacctcgacaaggacgacttcctgattcgcgtc
cagtcgagcctgatgggcgagtatgccgagttgccgaagatcgaggcgatcttccacgaa
ggcgcctgctcggacaccaccgagtgggacggccagttcatgctcgagaacaacttcgag
tactccaaggtgctgctcaacttctgcgaagcgaaccagattcccttcctctacgcgagc
tccgcggcgacctacggcgacagccaggtcttcaaggaaacgccggagttcgaaggtccg
ctcaacgtctacggctactccaagctgctgttcgatcagcacgtgcgccagcgctgggac
agcctgaccacccaggtcgtcggcttccgctatttcaatgtctacggcccgcgtgagcag
cacaagggcaagatggccagcgtagcctatcaccatcacacccaggtgaaggcgggcgag
aaccccaagctgttcggcgcctacgatggctacgatgccggcatgcagagccgtgacttc
gtctatgtcggtgatgtggtcgacgtgaacctgtggttcctcgatcacccggaagcctcc
ggcatcttcaatctgggtaccggtcgcgccgagccgttcaaggcgatcgccgagaccgtc
atcgagtactacgagaagggcgagatcgagtacatcgacttcccggaaaacctcaagggt
cgctaccagagcttcacgcgtgccgatatcggcaagctgcgcaaggccggctgcaacgtc
gaattcaagaccgttgcccagggcacgcgcgcctatctcgaatggctgaatcgctga
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