Cobetia amphilecti: LCW13_00240
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Entry
LCW13_00240 CDS
T07922
Name
(GenBank) polyprenyl synthetase family protein
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
camh
Cobetia amphilecti
Pathway
camh00900
Terpenoid backbone biosynthesis
camh01100
Metabolic pathways
camh01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
camh00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
LCW13_00240
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
camh01006
]
LCW13_00240
Enzymes [BR:
camh01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
LCW13_00240
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
LCW13_00240
2.5.1.29 geranylgeranyl diphosphate synthase
LCW13_00240
Prenyltransferases [BR:
camh01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
LCW13_00240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
UBU48771
LinkDB
All DBs
Position
52903..53835
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AA seq
310 aa
AA seq
DB search
MSGGLNTQVTPTASQASELIRSGQARSEAVLEALLTPGSAAVSERLEDAMRYSVLGGGKR
LRPVLLYAVGRALGCDEEAADRAALDAAAAALELVHAYSLVHDDLPAMDDDDLRRGRPTV
HRAFDEATAILAGDALLTLSFEVMATTGHVRTPALVRTLAEASGRRGMVAGQALDLEAVG
QFREVEALSRMHAYKTGALIRAAVRLGGLVAVDEQDSRLAALERYASAIGLAFQIQDDIL
DVTGDTATLGKTAGADAARDKPTYPSLLGLDGAQERAGQLLQEALDALAPLGEAAEPLAV
LARYMIERDH
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtggattgaatacgcaagtcacgccgacagcatcgcaggccagcgagctgatt
cgctctggacaggcgcgcagtgaggccgtgcttgaggcgttgttgactcccggcagtgcg
gcggtgagtgagcgtctcgaggacgccatgcgctacagcgtgctgggtggcggcaagcgt
ctgcgccccgtgctgctgtatgcggtgggtcgtgccctgggctgcgatgaggaggccgct
gaccgcgctgcgctggacgcggcggcagcggcgctcgaattggtgcatgcctattcgctg
gtccatgatgacctgccggccatggacgatgacgacctgcggcgtggccgtcccaccgtg
catcgcgccttcgatgaggcgaccgccattctcgcgggcgatgccctgttgacgctctcc
ttcgaagtgatggcgacgaccggccatgtacggacaccggccctggtgcgtaccctggcc
gaggcctccgggcggcgcggcatggtggccggtcaggcgctggacctcgaggcggtcggc
cagttccgcgaggtagaggcgctgtcacgcatgcatgcctacaagaccggcgcgctgata
cgcgccgcggtccgtctgggcggattggtggcagtcgacgagcaggattcgcgtcttgct
gccctggagcgctacgcttcggctatcggcctggccttccagatccaggatgacatcctg
gacgtgacgggcgacaccgcaacgcttggcaagacggccggtgctgacgctgcgcgcgac
aagccgacctatccctcgctgcttggactcgatggtgctcaagagcgagcaggtcagcta
ctgcaagaggccctggatgccctggcaccgttgggagaggccgcagagccactcgcggtg
ctggcgcgctacatgatcgagcgagaccactga
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