Cobetia amphilecti: LCW13_00550
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Entry
LCW13_00550 CDS
T07922
Name
(GenBank) pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
camh
Cobetia amphilecti
Brite
KEGG Orthology (KO) [BR:
camh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
camh03009
]
LCW13_00550
Enzymes [BR:
camh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
LCW13_00550
Ribosome biogenesis [BR:
camh03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
LCW13_00550
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Ribosomal_S9
Motif
Other DBs
NCBI-ProteinID:
UBU48826
LinkDB
All DBs
Position
123394..124158
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AA seq
254 aa
AA seq
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MRLDRWLTRQPQLNRRHALSALAAGRVRVNGATISDPLHEVGPFDDIHLSAPDATVCLQI
ARRPRHILLNKPAGVVTACHDPELPTVIDVLRDTLNARGEDSGWLAEIHHVGRLDRATTG
ALLLTNDGDVSARISDAGLEGPAKRYRMGLERPLTEAEQESAITQVRQGVLLEHDPRPTL
PAQLAFLTADQARLTLHEGRHHHVKRLWRSLGNRVVWLHRESVAGLSLEGLAPGEWRELT
REECSRLGAAQPRG
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgcggctggaccgctggctgacacgtcagccacagctcaaccgtcgtcatgcgctctcg
gcgctggcggcggggcgtgtgcgggtcaacggcgcgacgatcagcgacccgctgcatgag
gtcggccccttcgatgacatccacctgtcagcgcctgacgcgaccgtctgcctgcagatc
gcgcggcgtccacgtcatatcctgctcaacaagcctgccggggtcgtgacggcctgtcat
gaccccgaactccccaccgtgatcgatgtgttgcgtgacacgctgaatgcacgcggcgag
gacagcggctggctggccgagatccaccatgtcgggcgtctcgaccgtgcgacgaccggt
gccctgctgctgaccaacgacggcgatgtctcggcgcgcatcagcgatgccgggctcgag
ggccccgccaagcgctatcgcatggggctggagcggcccctgacggaggccgaacaggaa
agcgccatcacacaggttcgtcagggggtgctgctcgaacatgatccgcgcccgacactg
ccggcacagcttgcgtttctcaccgcggatcaggcacgcctgacgctgcacgagggacgc
catcatcacgtcaagcgactgtggcgcagcctgggcaatcgcgtggtgtggctgcaccgt
gagtcggtggcgggcttgagtctcgaggggctggcgccgggggagtggcgcgagcttacc
cgcgaggagtgttcacggctgggggccgcgcagcctcgcgggtga
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