Cobetia amphilecti: LCW13_00650
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Entry
LCW13_00650 CDS
T07922
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
camh
Cobetia amphilecti
Pathway
camh00300
Lysine biosynthesis
camh00470
D-Amino acid metabolism
camh01100
Metabolic pathways
camh01110
Biosynthesis of secondary metabolites
camh01120
Microbial metabolism in diverse environments
camh01230
Biosynthesis of amino acids
Module
camh_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
camh00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LCW13_00650 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LCW13_00650 (dapF)
Enzymes [BR:
camh01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
LCW13_00650 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Draxin
Motif
Other DBs
NCBI-ProteinID:
UBU48842
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Position
complement(143367..144197)
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AA seq
276 aa
AA seq
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MLVNFTKMHGLGNDFMVIDLISQRSRLRDADIRRLADRNFGIGFDQLLVVEPPRDPDMDF
RYRIYNADGSEVENCGNGARCFARFVREQRLTTKREIRVETAGGPLTLVVAEDGRVRVDM
GAPRFAPAALSFEAEADLPVHTLDVDGETLEIGVVSMGNPHAVLLVDSVEQAPVLTLGPL
IEAHPRFAKRVNAGFLEVVSPHEARLRVFERGVGETLACGTGACAAVASGIRRGLLASPV
NVTLPGGTLSIEWGGDGQPVFMTGPAETVFEGRIIL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgctggtgaacttcaccaagatgcacggattgggcaatgacttcatggtcattgacctg
atctcgcagcgcagccgcctgcgcgatgccgatatccgccgtctggcggaccgcaacttc
ggcatcggcttcgaccagctgctggtggtcgagccgccccgcgacccggacatggacttc
cgctatcgcatctacaatgccgatggcagtgaagtcgagaactgcggcaacggggcgcgc
tgcttcgcgcgcttcgtgcgtgaacagcgcctgaccaccaagcgcgagattcgcgtcgag
acggccggcggcccgctgaccctggtcgtcgccgaggatggccgtgtgcgcgtcgacatg
ggcgcgccgcgcttcgcccccgccgcgctgtccttcgaggccgaggccgacctgccggtg
cacaccctggatgtcgacggcgagacgctggaaatcggcgtcgtctcgatgggcaacccc
cacgcggtgctgctggtcgacagtgtcgaacaggccccggtgctgacgctgggcccgctg
atcgaggcgcatccgcgcttcgccaagcgcgtcaatgccggcttcctcgaggtcgtctcg
ccacatgaagcgcgcctgcgtgtcttcgagcgcggtgtcggcgagacgctggcctgtggc
accggcgcctgtgcggcggtcgcgtccggcattcgccgtggcctgctggcaagcccggtc
aatgtcacgctgcccggcggcaccctgagcatcgaatggggtggcgacggccagccggta
ttcatgaccggccccgccgagaccgtcttcgaaggccgcatcatcctgtag
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