Cobetia amphilecti: LCW13_00865
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Entry
LCW13_00865 CDS
T07922
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
camh
Cobetia amphilecti
Brite
KEGG Orthology (KO) [BR:
camh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
camh03016
]
LCW13_00865 (truB)
Enzymes [BR:
camh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LCW13_00865 (truB)
Transfer RNA biogenesis [BR:
camh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LCW13_00865 (truB)
Prokaryotic type
LCW13_00865 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
UBU48879
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All DBs
Position
191752..192681
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AA seq
309 aa
AA seq
DB search
MARRRRGLPIDGVLLLDKPKGMSSNYALQKARRLYQAQKAGHTGTLDPMATGLLPVCFGE
ATKFSSHLLEADKVYRARIKFGQVTDTGDAEGTVIREREIPEIAQAELDAVLDRFRGEID
QVPPMYSALKHQGRPLYELARQGIEIERAVRRVTIYNMALLARHSDGIEIEVAVSKGTYI
RSLAEDIGEALGCGAHLTALRRLKTGPFTGDAMLDFERLEALADQQAREGVLLPVDILLD
HLPCLDITAEMARMILRGQQAETTTGSLEVDSLARVYQDQQLLGLVRIAAEGVIAPRRLL
SSAVEAAAG
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtcgtcgtcgcggcttgccgatcgatggcgttctgttgctggacaagcccaag
ggcatgtccagcaactatgcgcttcagaaggctcgtcgcctctaccaggcgcagaaggcc
ggtcataccggcacgctcgacccgatggcgaccggcttgttgccggtctgcttcggggaa
gcgaccaagttctcctcgcatcttctcgaggcagacaaggtctatcgggcacggatcaag
tttggccaggtcaccgataccggtgatgcggaaggcacggtgattcgcgagcgggagatt
cccgagattgcgcaggccgagctggacgcggtgctggacaggttccgtggcgagatagat
caggtaccgccgatgtactccgcgctcaagcaccagggacgtccgctctatgagctggcg
cgccaggggattgaaatcgagcgtgcagtccgtcgcgttaccatctacaatatggcgctt
cttgcgcggcactccgatggcatcgagatcgaagtggcggtcagcaagggtacctacata
cgcagtctggccgaggatatcggcgaggcgctgggctgtggagcccacctcacggcactg
cgtcgtctcaagacgggcccgttcacgggtgatgccatgctggatttcgagcgcctcgag
gcgctggctgaccagcaggcacgtgaaggcgttctgttacctgtcgacatcctgctcgat
catctcccgtgtctcgacatcactgccgagatggcgcggatgatattgcgtggtcaacag
gctgaaacgacgacagggtcgctggaagtggactccctggctcgtgtgtatcaggaccag
cagttgctcgggctggtccggattgcggcggagggcgtcatcgctcctcgccgactgctc
agttctgccgtcgaggcggcggctgggtga
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